Sphingomonas species SRS2 |
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Putative Sphingomonas species SRS2 RM systems
Ref: Nielsen,T.K. et al. Genome Announc 3 (3), e00569-15 (2015)
REBASE ref # 19851
Contig set: 4,631,488 bp
GenBank #: LARW00000000 (NZ_LARW00000000)
REBASE acronym: SspSRS2
Org_num: 16343
All begin WP12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2860 | chromosome partitioning protein ParA | |||
| 2865 | R | Gal1191ORF5855P (77% identity) | SspSRS2ORF2865P | |
| 2870 | 109 aa hypothetical protein | |||
| 5265 | permease | |||
| 5270 | M | M.SspCFD1ORFBP (93% identity) | M.SspSRS2ORF5270P | |
| 5275 | 278 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17720 | 75 aa hypothetical protein | |||
| 17725 | M | M.SspSRS2ORF16485P (84% identity) | M.SspSRS2ORF17725P | |
| 17730 | 155 aa hypothetical protein | |||
| 19930 | 124 aa hypothetical protein L485_00055 | |||
| 19935 | M | M.SbaLL03ORFAP (50% identity) | GAAGA | M.SspSRS2ORF19935P |
| 19940 | XRE family transcriptional regulator | |||
| 3140 | 134 aa hypothetical protein | |||
| 3145 | M | M.Rdi20ORF17490P (89% identity) | GANTC | M.SspSRS2ORF3145P |
| 3150 | dihydropteroate synthase | |||
| 16480 | 63 aa hypothetical protein | |||
| 16485 | M | M.SspSRS2ORF17725P (84% identity) | M.SspSRS2ORF16485P | |
| 16490 | 100 aa hypothetical protein | |||
| 13525 | 84 aa hypothetical protein | |||
| 13530 | M | M.SwiDP58ORFCP (63% identity) | RAATTY | M.SspSRS2ORF13530P |
| 13535 | glutamate synthase | |||
| 21880 | 3-oxoacyl-ACP reductase | |||
| 21885 | M | M.SwiDP58ORFNP (54% identity) | M.SspSRS2ORF21885P | |
| 21895 | transposase | |||
| 19805 | 155 aa hypothetical protein | |||
| 19820 | RM | HanFP35ORF15830P (50% identity) | CACCAC | SspSRS2ORF19820P |
| 19825 | DEAD/DEAH box helicase | |||
| 3235 | 66 aa hypothetical protein | |||
| 3240 | M | M.SspDC6ORF310P (73% identity) | M.SspSRS2ORF3240P | |
| 3245 | 195 aa hypothetical protein, partial | |||
| 10470 | 182 aa hypothetical protein | |||
| 10475 | M | M.Bsp144S4ORF7635P (45% identity) | M.SspSRS2ORF10475P | |
| 10480 | 405 aa hypothetical protein | |||
| 18360 | required for attachment to host cells family | |||
| 18365 | M | M.Pim1986ORFGP (55% identity) | M.SspSRS2ORF18365P | |
| 18370 | 138 aa hypothetical protein | |||
| 16975 | 128 aa hypothetical protein, partial | |||
| 16980 | M | M.NspES21ORF7410P (72% identity) | GATC | M.SspSRS2ORF16980P |
| 16985 | DNA methyltransferase | |||
| 16980 | 196 aa hypothetical protein | |||
| 16985 | M | M.SwiRWORF2199P (70% identity) | TGGCCA | M.SspSRS2ORF16985P |
| 16990 | 140 aa hypothetical protein | |||
| 10765 | 128 aa hypothetical protein | |||
| 10770 | M | M.Swi218ORF17495P (40% identity) | M.SspSRS2ORF10770P | |
| 10775 | 149 aa hypothetical protein | |||
| 16390 | 87 aa hypothetical protein | |||
| 16395 | M | M.SspRAC03ORF3947P (49% identity) | M.SspSRS2ORF16395P | |
| 16400 | 336 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16120 | 882 aa hypothetical protein | |||
| 16125 | R | Apa386BORF8P (87% identity) | SspSRS2ORF16130P | |
| 16130 | M | M.Sin12872ORFEP (83% identity) | M.SspSRS2ORF16130P | |
| 16135 | 78 aa hypothetical protein | |||