Escherichia coli F6339-c9 |
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Putative Escherichia coli F6339-c9 RM systems
Ref: Pattabiraman,V. and Bopp,C.A. Genome Announc 3 (3), e00564-15 (2015)
REBASE ref # 19841
Contig set: 4,908,703 bp
GenBank #: JYIH00000000 (NZ_JYIH00000000)
REBASE acronym: EcoF6339
Org_num: 16323
All begin UH30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18420 | metal-dependent hydrolase | |||
| 18425 | R | EcosB2CORFFP (99% identity) | EcoF6339ORF18440P | |
| 18430 | 227 aa hypothetical protein | |||
| 18435 | S | S.EcosB2CORFFP (100% identity) | S.EcoF6339ORF18440P | |
| 18440 | M | M.EcosB2CORFFP (100% identity) | M.EcoF6339ORF18440P | |
| 18445 | 251 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19745 | LexA family transcriptional regulator | |||
| 19750 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoF6339ORF19750P |
| 19755 | 162 aa hypothetical protein | |||
| 23575 | 60 aa hypothetical protein | |||
| 23580 | M | M1.EcoF736ORF20735P (100% identity) | ACTGGG | M1.EcoF6339ORF23580P |
| 23585 | M | M2.EcoF736ORF20735P (100% identity) | ACTGGG | M2.EcoF6339ORF23580P |
| 23590 | PLD-like domain protein | |||
| 24020 | Mu prophage protein Com | |||
| ??? | M | M.EcoS6685ORFIP (100% identity) | M.EcoF6339ORF24025P | |
| 24030 | translation inhibitor protein RaiA | |||
| 23270 | TciA | |||
| 23285 | M | M.EcoF736ORF22975P (100% identity) | M.EcoF6339ORF23285P | |
| 23290 | 70 aa hypothetical protein | |||
| 24160 | holin | |||
| 24165 | M | M.Sso63633ORF22290P (100% identity) | M.EcoF6339ORF24165P | |
| 24170 | 57 aa hypothetical protein | |||
| 9285 | 59 aa hypothetical protein | |||
| 9290 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoF6339ORF9290P |
| 9295 | Fis family transcriptional regulator | |||
| 19950 | multidrug DMT transporter | |||
| 19955 | V | V.SsoSE61DcmP (100% identity) | V.EcoF6339DcmP | |
| 19960 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoF6339DcmP |
| 19965 | hydrolase | |||
| 7925 | 89 aa hypothetical protein | |||
| 7930 | M | M.EcoZLWTORF24570P (100% identity) | GATC | M.EcoF6339ORF7930P |
| 7940 | 92 aa hypothetical protein | |||
| 10670 | cell division protein DamX | |||
| 10675 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoF6339DamP |
| 10680 | ribulose-phosphate 3-epimerase | |||