Clostridium species IBUN13A |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridium species IBUN13A RM systems
Ref: Rosas-Morales,J.P. et al. Genome Announc 3 (3) (2015)
REBASE ref # 19738
Contig set: 4,643,590 bp
GenBank #: JZWG00000000 (NZ_JZWG00000000)
REBASE acronym: Csp13A
Org_num: 15966
All begin ClosIBUN13A_CONTIG116g, ClosIBUN13A_CONTIG184g, ClosIBUN13A_CONTIG187g, ClosIBUN13A_CONTIG249g, ClosIBUN13A_CONTIG89g
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1184 | oxidoreductase, YhhX family | |||
| 1170 | R | Csp125CORF75P (100% identity) | Csp13AORF1175P | |
| 1180 | S | S.Csp22AORF1124P (100% identity) | S.Csp13AORF1175P | |
| 1175 | M | M2.Csp125CORF75P (100% identity) | M2.Csp13AORF1175P | |
| 1173 | M | M1.Csp22AORF1124P (100% identity) | M1.Csp13AORF1175P | |
| 1174 | 206 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2924 | M | M.CspLQ25ORF8835P (100% identity) | M.Csp13AORF2924P | |
| 2925 | 64 aa hypothetical protein | |||
| 2994 | HAD-superfamily hydrolase, subfamily IA, variant | |||
| 2975 | M | M.Csp62FORF255P (100% identity) | GGCC | M.Csp13AORF2975P |
| 2998 | 413 aa hypothetical protein | |||
| 2975 | 719 aa hypothetical protein | |||
| 2998 | M | M.Csp62FORF290P (100% identity) | M.Csp13AORF2998P | |
| 2985 | LPPG:FO 2-phospho-L-lactate transferase like, | |||
| 2936 | 164 aa hypothetical protein | |||
| 2956 | R | R2.Csp62FORF311P (100% identity) | R1.Csp13AORF2958P | |
| 2948 | R | R1.Csp62FORF311P (100% identity) | R2.Csp13AORF2958P | |
| 2958 | M | M2.Csp62FORF311P (100% identity) | M1.Csp13AORF2958P | |
| 3022 | M | M1.Csp62FORF311P (100% identity) | M2.Csp13AORF2958P | |
| 2978 | Transition state regulatory protein AbrB | |||
| 1697 | 375 aa hypothetical protein | |||
| ??? | R | Csp22AORF1376P (100% identity) | GAATGC | Csp13AORF1709P |
| 1709 | M | M2.Csp22AORF1376P (100% identity) | GAATGC | M1.Csp13AORF1709P |
| 1707 | M | M1.Csp22AORF1376P (100% identity) | GAATGC | M2.Csp13AORF1709P |
| 4015 | 60 aa hypothetical protein | |||
| 4014 | R | Csp62FORF3172P (100% identity) | Csp13AORF4014P | |
| 4005 | 154 aa hypothetical protein | |||