Escherichia coli St. Olav157 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli St. Olav157 RM systems
Ref: Gabrielsen,C. et al. Genome Announc 3 (3) (2015)
REBASE ref # 19672
Contig set: 5,386,695 bp
GenBank #: JZDX00000000 (NZ_JZDX00000000)
REBASE acronym: EcoSO157
Org_num: 15931
All begin UN89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17920 | 128 aa hypothetical protein | |||
| 17925 | M | M.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | M.EcoSO157ORF17925P |
| 17930 | S | S.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | S.EcoSO157ORF17925P |
| 17935 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4115 | TciA | |||
| 4130 | M | M.EcoSO63ORF26330P (100% identity) | M.EcoSO157ORF4130P | |
| 4135 | phage protein | |||
| 27230 | TrmB family transcriptional regulator | |||
| 27235 | M | M.EcoZ1836ORF11435P (84% identity) | M.EcoSO157ORF27235P | |
| ??? | M | M.EcoYB141ORF15470P (26% identity) | M.EcoSO157ORF27750P | |
| 17440 | LexA family transcriptional regulator | |||
| 17445 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoSO157ORF17445P |
| 17450 | 162 aa hypothetical protein | |||
| 7310 | 59 aa hypothetical protein | |||
| 7315 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSO157ORF7315P |
| 7320 | Fis family transcriptional regulator | |||
| 1895 | TrmB family transcriptional regulator | |||
| 1900 | M | M.EcoSO63ORF26225P (100% identity) | M.EcoSO157ORF1900P | |
| 1905 | 394 aa hypothetical protein | |||
| 27435 | hydrolase | |||
| 27440 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoSO157DcmP |
| 27445 | V | V.SsoSE61DcmP (100% identity) | V.EcoSO157DcmP | |
| 27450 | multidrug DMT transporter | |||
| 4885 | 101 aa hypothetical protein | |||
| 4890 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoSO157ORF4890P | |
| 4895 | 73 aa hypothetical protein | |||
| 24410 | ribulose-phosphate 3-epimerase | |||
| 24415 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSO157DamP |
| 24420 | cell division protein DamX | |||
| 10815 | 308 aa hypothetical protein | |||
| 10820 | M | M.Sen527ORF25750P (99% identity) | M.EcoSO157ORF10820P | |
| 10825 | 73 aa hypothetical protein | |||
| 9325 | LexA family transcriptional regulator | |||
| 9330 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoSO157ORF9330P |
| 9335 | 162 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9135 | DNA polymerase V | |||
| 9140 | R | EcoSO63GmrSDP (100% identity) | EcoSO157GmrSDP | |
| 9145 | 179 aa hypothetical protein | |||
| 17905 | restriction endonuclease | |||
| 17910 | R | EcoSO63McrBP (100% identity) | EcoSO157McrBP | |
| 17915 | R | EcoSO63McrCP (100% identity) | EcoSO157McrCP | |
| 17920 | 128 aa hypothetical protein | |||