Escherichia coli St. Olav63 |
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Putative Escherichia coli St. Olav63 RM systems
Ref: Gabrielsen,C. et al. Genome Announc 3 (3) (2015)
REBASE ref # 19672
Contig set: 5,321,480 bp
GenBank #: JZDW00000000 (NZ_JZDW00000000)
REBASE acronym: EcoSO63
Org_num: 15930
All begin UN88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26870 | 128 aa hypothetical protein | |||
| 26875 | M | M.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | M.EcoSO63ORF26875P |
| 26880 | S | S.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | S.EcoSO63ORF26875P |
| 26885 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26315 | TciA | |||
| 26330 | M | M.EcoSO17ORF5175P (100% identity) | M.EcoSO63ORF26330P | |
| 26335 | phage protein | |||
| 24980 | Shiga toxin subunit A | |||
| 25000 | M | M.EcoZ1836ORF11435P (100% identity) | M.EcoSO63ORF25000P | |
| 25005 | TrmB family transcriptional regulator | |||
| 26380 | LexA family transcriptional regulator | |||
| 26385 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoSO63ORF26385P |
| 26390 | 162 aa hypothetical protein | |||
| 26220 | TrmB family transcriptional regulator | |||
| 26225 | M | M.EcoSO17ORF1960P (100% identity) | M.EcoSO63ORF26225P | |
| 10135 | 162 aa hypothetical protein | |||
| 10140 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoSO63ORF10140P |
| 10145 | LexA family transcriptional regulator | |||
| 20840 | ribulose-phosphate 3-epimerase | |||
| 20845 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSO63DamP |
| 20850 | cell division protein DamX | |||
| 22880 | 101 aa hypothetical protein | |||
| 22885 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoSO63ORF22885P | |
| 22890 | 73 aa hypothetical protein | |||
| 4325 | hydrolase | |||
| 4330 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoSO63DcmP |
| 4335 | V | V.SsoSE61DcmP (100% identity) | V.EcoSO63DcmP | |
| 4340 | multidrug DMT transporter | |||
| 7515 | Fis family transcriptional regulator | |||
| 7520 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSO63ORF7520P |
| 7525 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10330 | tail fiber protein | |||
| 10335 | R | EcoSO17GmrSDP (100% identity) | EcoSO63GmrSDP | |
| 10340 | DNA polymerase V | |||
| 26855 | restriction endonuclease | |||
| 26860 | R | EcoSO17McrBP (100% identity) | EcoSO63McrBP | |
| 26865 | R | EcoSO17McrCP (100% identity) | EcoSO63McrCP | |
| 26870 | 128 aa hypothetical protein | |||