Escherichia coli St. Olav17 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli St. Olav17 RM systems
Ref: Gabrielsen,C. et al. Genome Announc 3 (3) (2015)
REBASE ref # 19672
Contig set: 5,452,601 bp
GenBank #: JYKT00000000 (NZ_JYKT00000000)
REBASE acronym: EcoSO17
Org_num: 15918
All begin UC21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9195 | 128 aa hypothetical protein | |||
| 9200 | M | M.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | M.EcoSO17ORF9200P |
| 9205 | S | S.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | S.EcoSO17ORF9200P |
| 9210 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1955 | 99 aa hypothetical protein | |||
| 1960 | M | M.EcoSO63ORF26225P (100% identity) | M.EcoSO17ORF1960P | |
| 1965 | TrmB family transcriptional regulator | |||
| 5160 | TciA | |||
| 5175 | M | M.EcoSO63ORF26330P (100% identity) | M.EcoSO17ORF5175P | |
| 5180 | phage protein | |||
| 8715 | LexA family transcriptional regulator | |||
| 8720 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoSO17ORF8720P |
| 8725 | 162 aa hypothetical protein | |||
| 300 | 59 aa hypothetical protein | |||
| 305 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSO17ORF305P |
| 310 | Fis family transcriptional regulator | |||
| 4920 | 73 aa hypothetical protein | |||
| 4925 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoSO17ORF4925P | |
| 4930 | 101 aa hypothetical protein | |||
| 14460 | hydrolase | |||
| 14465 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoSO17DcmP |
| 14470 | V | V.SsoSE61DcmP (100% identity) | V.EcoSO17DcmP | |
| 14475 | multidrug DMT transporter | |||
| 5925 | 162 aa hypothetical protein | |||
| 5930 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoSO17ORF5930P |
| 5935 | LexA family transcriptional regulator | |||
| 15015 | ribulose-phosphate 3-epimerase | |||
| 15020 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSO17DamP |
| 15025 | cell division protein DamX | |||
| 4710 | TrmB family transcriptional regulator | |||
| 4715 | M | M.EcoZ1836ORF11435P (100% identity) | M.EcoSO17ORF4715P | |
| 4735 | Shiga toxin subunit A | |||
| 19000 | 103 aa hypothetical protein | |||
| 19005 | M | M.SflN101ORF24625P (100% identity) | M.EcoSO17ORF19005P | |
| 19010 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6115 | 179 aa hypothetical protein | |||
| 6120 | R | EcoSO63GmrSDP (100% identity) | EcoSO17GmrSDP | |
| 6125 | DNA polymerase V | |||
| 9180 | restriction endonuclease | |||
| 9185 | R | EcoSO63McrBP (100% identity) | EcoSO17McrBP | |
| 9190 | R | EcoSO63McrCP (100% identity) | EcoSO17McrCP | |
| 9195 | 128 aa hypothetical protein | |||