Salmonella enterica subsp. enterica 10TTU468 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica 10TTU468 RM systems
Ref: den Bakker,H.C. et al. unpublished
REBASE ref # 19596
Contig set: 4,950,985 bp
GenBank #: JXYU00000000 (NZ_JXYU00000000)
REBASE acronym: Sen468
Org_num: 15703
All begin TR76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4700 | endoribonuclease SymE | |||
| 4705 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.Sen468ORF4710P |
| 4710 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.Sen468ORF4710P |
| 4715 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | Sen468ORF4710P |
| 4720 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19730 | endonuclease | |||
| 19735 | M | M.SenU1590ORF19690P (100% identity) | GATC | M.Sen468ORF19735P |
| 19740 | 75 aa hypothetical protein | |||
| 19925 | replication protein A | |||
| 19930 | M | M.SenU1590ORF19885P (100% identity) | GATC | M.Sen468ORF19930P |
| 19935 | 109 aa hypothetical protein | |||
| 23675 | ribulose-phosphate 3-epimerase | |||
| 23680 | M | M.StyTDamP (100% identity) | GATC | M.Sen468DamP |
| 23685 | cell division protein DamX | |||
| 15805 | multidrug DMT transporter | |||
| 15810 | V | V.StyUK1DcmP (100% identity) | V.Sen468DcmP | |
| 15815 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.Sen468DcmP |
| 15820 | hydrolase | |||
| 4540 | histidine kinase | |||
| 4545 | M | M.SenXB08ORF19920P (100% identity) | RCCGGY | M.Sen468ORF4545P |
| 4550 | transposase | |||
| 11680 | 82 aa hypothetical protein | |||
| 11685 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.Sen468ORF11685P |
| 11690 | methyltransferase | |||
| 11735 | lysozyme | |||
| ??? | M | M.SenU1590ORF11730P (100% identity) | M.Sen468ORF11740P | |
| 11745 | endopeptidase | |||
| 23175 | Fis family transcriptional regulator | |||
| 23180 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen468ORF23180P |
| 23185 | membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6965 | sugar transporter | |||
| 6970 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.Sen468ORF6970P |
| ??? | R | SspA292ORF17210P (100% identity) | CAGAG | Sen468ORF6970P |
| 6980 | 33 aa hypothetical protein | |||