Escherichia coli SCB11 |
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Putative Escherichia coli SCB11 RM systems
Ref: Chavez-Bueno,S. et al. unpublished
REBASE ref # 19172
Contig set: 5,105,498 bp
GenBank #: JSYT00000000 (NZ_JSYT00000000)
REBASE acronym: EcoSCB11
Org_num: 15173
All begin GT41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13140 | alcohol dehydrogenase | |||
| 13150 | R | EcosA33IP (100% identity) | EcoSCB11ORF13160P | |
| 13155 | S | S.EcosA4I (100% identity) | S.EcoSCB11ORF13160P | |
| 13160 | M | M.EcosA4I (100% identity) | M.EcoSCB11ORF13160P | |
| 13165 | restriction methylase | |||
| 13440 | endoribonuclease SymE | |||
| 13445 | R | Eco955ORF22595P (100% identity) | EcoSCB11ORF13455P | |
| 13450 | S | S.EcosA4II (100% identity) | S.EcoSCB11ORF13455P | |
| 13455 | M | M.EcosA4II (100% identity) | M.EcoSCB11ORF13455P | |
| 13460 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17845 | crossover junction endodeoxyribonuclease | |||
| 17850 | M | M.Eco955ORF22350P (100% identity) | GATC | M.EcoSCB11ORF17850P |
| 17855 | 162 aa hypothetical protein | |||
| 17045 | transposase | |||
| 17050 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoSCB11ORF17050P |
| 17055 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoSCB11ORF17050P |
| 17060 | 117 aa hypothetical protein | |||
| 24275 | LexA family transcriptional regulator | |||
| 24280 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoSCB11ORF24280P |
| 24285 | 162 aa hypothetical protein | |||
| 23900 | ATPase | |||
| 23905 | M | M.EcosS3ORF15775P (100% identity) | M.EcoSCB11ORF23905P | |
| 23910 | 118 aa hypothetical protein | |||
| 22305 | ribulose-phosphate 3-epimerase | |||
| 22310 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCB11DamP |
| 22315 | cell division protein DamX | |||
| 7395 | 75 aa hypothetical protein | |||
| 7400 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoSCB11ORF7400P |
| 7405 | endonuclease | |||
| 12190 | Fis family transcriptional regulator | |||
| 12195 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSCB11ORF12195P |
| 12200 | 59 aa hypothetical protein | |||
| 2745 | multidrug DMT transporter | |||
| 2750 | V | V.EcosA4DcmP (100% identity) | V.EcoSCB11DcmP | |
| 2755 | M | M.EcosA33DcmP (100% identity) | CCWGG | M.EcoSCB11DcmP |
| 2760 | hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13165 | restriction methylase | |||
| 13170 | R | EcosA4McrBP (100% identity) | EcoSCB11McrBP | |
| ??? | R | Eco955McrCP (100% identity) | EcoSCB11McrCP | |
| 13180 | restriction endonuclease | |||