Escherichia coli RS218 |
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Putative Escherichia coli RS218 RM systems
Ref: Chavez-Bueno,S. et al. unpublished
REBASE ref # 19172
Contig set: 5,173,076 bp
GenBank #: JWZW00000000 (NZ_JWZW00000000)
REBASE acronym: EcoRS218
Org_num: 15172
All begin SC80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7220 | endoribonuclease SymE | |||
| 7225 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoRS218ORF7230P |
| 7230 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.EcoRS218ORF7230P |
| 7235 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoRS218ORF7230P |
| 7240 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18665 | 75 aa hypothetical protein | |||
| 18685 | M | M.SboBSORF1444P (100% identity) | A | M.EcoRS218ORF18685P |
| 18690 | TrmB family transcriptional regulator | |||
| 21355 | 103 aa hypothetical protein | |||
| 21360 | M | M.Sfl0030ORFCP (100% identity) | M.EcoRS218ORF21360P | |
| 21365 | 73 aa hypothetical protein | |||
| 23455 | ATPase | |||
| 23460 | M | M.EcosS3ORF15775P (100% identity) | M.EcoRS218ORF23460P | |
| 23465 | 118 aa hypothetical protein | |||
| 25275 | LexA family transcriptional regulator | |||
| 25280 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoRS218ORF25280P |
| 25285 | 162 aa hypothetical protein | |||
| 20995 | ribulose-phosphate 3-epimerase | |||
| 21000 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoRS218DamP |
| 21005 | cell division protein DamX | |||
| 22125 | 162 aa hypothetical protein | |||
| 22130 | M | M.EcoSCU484ORF22615P (100% identity) | GATC | M1.EcoRS218ORF22130P |
| 22135 | LexA family transcriptional regulator | |||
| 22140 | crossover junction endodeoxyribonuclease | |||
| 22145 | kilA-N domain protein | |||
| 22150 | 329 aa hypothetical protein | |||
| 22155 | antitermination protein | |||
| 22160 | 148 aa hypothetical protein | |||
| 22165 | phage protein | |||
| 22170 | M | M.Sso63633ORF22290P (100% identity) | M2.EcoRS218ORF22130P | |
| 22175 | holin | |||
| 3760 | membrane protein | |||
| ??? | M | M.EcoVL02ORF18020P (99% identity) | M.EcoRS218ORF3765P | |
| 3770 | membrane protein | |||
| 10230 | Fis family transcriptional regulator | |||
| 10235 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoRS218ORF10235P |
| 10240 | 59 aa hypothetical protein | |||
| 4805 | multidrug DMT transporter | |||
| 4810 | V | V.SflC32DcmP (74% identity) | V.EcoRS218DcmP | |
| 4815 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.EcoRS218DcmP |
| 4820 | hydrolase | |||
| 2280 | 75 aa hypothetical protein | |||
| 2285 | M | M.Eco34697ORF11825P (100% identity) | GATC | M.EcoRS218ORF2285P |
| 2290 | endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24625 | resolvase | |||
| 24630 | R | EspFAAGmrSDP (100% identity) | EcoRS218GmrSD2P | |
| 24635 | damage-inducible protein DinI | |||
| 7235 | DEAD/DEAH box helicase | |||
| 7240 | R | EcosS1MrrP (100% identity) | EcoRS218MrrP | |
| 7245 | GTP-binding protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16620 | P21 prophage-derived protein NinB | |||
| 16625 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoRS218ORF16625P |
| 16630 | protein ninE | |||