Escherichia coli VR50 |
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Putative Escherichia coli VR50 RM systems
Ref: Beatson,S.A. et al. Infect. Immun. (2015) In press
REBASE ref # 19465
| Sequence length: | GenBank #: | |
| Chromosome: | 5,000,386 bp | CP011134 |
| plasmid pVR50A: | 70,533 bp | CP011135 |
REBASE acronym: EcoVR50
Org_num: 15404
All begin ECVR50_, ECVR50_A
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4825 | toxic protein SymE | |||
| 4827 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.EcoVR50I |
| 4828 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoVR50I |
| 4829 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoVR50IP |
| 4830 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2086 | inner membrane transporter YedA | |||
| 2087 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoVR50DcmP |
| 2088 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoVR50Dcm |
| 2089 | uncharacterized protein YedJ | |||
| 3670 | DNA-binding protein Fis | |||
| 3671 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoVR50ORF3671P |
| 3672 | uncharacterized protein YhdU | |||
| 3795 | ribulose-phosphate 3-epimerase | |||
| 3796 | M | DNA adenine methylase | GATC | M.EcoVR50Dam |
| 3797 | protein DamX | |||
| plasmid pVR50A | ||||
| 55 | 73 aa hypothetical protein | |||
| 56 | M | M.Sen143ORF26480P (100% identity) | M.EcoVR50ORF56P | |
| 57 | YfdA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4822 | helicase related protein | |||
| 4823 | R | Ssp28760McrCP (100% identity) | EcoVR50McrCP | |
| 4824 | R | Ssp28760McrBP (100% identity) | EcoVR50McrBP | |
| 4825 | toxic protein SymE | |||
| 4829 | restriction-modification enzyme type I R | |||
| 4830 | R | Ssp28760MrrP (99% identity) | EcoVR50MrrP | |
| 4831 | GTP-binding protein YjiA | |||