Lactobacillus sakei wikim 22 |
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Putative Lactobacillus sakei wikim 22 RM systems
Ref: Lee,J.H. et al. unpublished
REBASE ref # 18760
Contig set: 2,185,902 bp
GenBank #: JRFY00000000 (NZ_JRFY00000000)
REBASE acronym: Lsa22
Org_num: 14529
All begin KY41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8215 | S | S.Lla243ORF12040P (56% identity) | S.Lsa22ORF8215P | |
| 4355 | integrase | |||
| 4360 | R | LsapRV500ORFAP (98% identity) | Lsa22ORF4380P | |
| 4365 | 79 aa hypothetical protein | |||
| ??? | S | S2.Wco830ORF7955P (50% identity) | S.Lsa22ORF4380P | |
| 4380 | M | M.Lsa65ORF10435P (97% identity) | M.Lsa22ORF4380P | |
| 4385 | RepB-like protein | |||
| 10530 | M | M.WciJW15ORF12180P (97% identity) | M.Lsa22ORF10530P | |
| 10535 | R | Lsa404ORFBP (97% identity) | Lsa22ORF10530P | |
| 10540 | replication protein RepB | |||
| 2640 | restriction endonuclease | |||
| 2645 | M | M.Lpl1478ORF16295P (99% identity) | M.Lsa22ORF2640P | |
| 2650 | S | S.Lbr1106ORF30P (97% identity) | S.Lsa22ORF2640P | |
| 2655 | R | Lpa1995ORF16160P (97% identity) | Lsa22ORF2640P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3530 | 1215 aa hypothetical protein | |||
| 3535 | RM | Lsa104ORF6325P (75% identity) | Lsa22ORF3535P | |
| 3540 | pseudogene | |||
| 3535 | pseudogene | |||
| 3540 | RM | LsaFBL1ORFAP (42% identity) | Lsa22ORF3540P | |
| 3545 | pseudogene | |||
| 3545 | pseudogene | |||
| 3550 | RM | LsaFBL1ORFCP (100% identity) | Lsa22ORF3550P | |
| 3555 | 845 aa hypothetical protein | |||