Escherichia coli 2011EL-1251-4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 2011EL-1251-4 RM systems
Ref: Pattabiraman,V. and Bopp,C.A. unpublished
REBASE ref # 18752
GenBank #: JPXM00000000
REBASE acronym: Eco12514
Org_num: 14523
All begin JO88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14145 | metal-dependent hydrolase | |||
| 14150 | R | EcosB2CORFFP (99% identity) | Eco12514ORF14165P | |
| 14155 | 227 aa hypothetical protein | |||
| 14160 | S | S.EcosB2CORFFP (100% identity) | S.Eco12514ORF14165P | |
| 14165 | M | M.EcosB2CORFFP (100% identity) | M.Eco12514ORF14165P | |
| 14170 | 388 aa hypothetical protein | |||
| 19375 | transcription factor | |||
| 19380 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco12514ORF19380P |
| 19385 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.Eco12514ORF19380P |
| 19390 | 218 aa hypothetical protein | |||
| 19395 | Appr-1-p processing protein | |||
| 19400 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco12514ORF19380P |
| 19405 | metal-dependent hydrolase | |||
| 5000 | endoribonuclease SymE | |||
| 5005 | S | S.EcosS142ORF37770P (100% identity) | S.Eco12514ORF5010P | |
| 5010 | M | M.EcosS142ORF37770P (100% identity) | M.Eco12514ORF5010P | |
| ??? | R | EcosB2CORFBP (100% identity) | Eco12514ORF5010P | |
| 5020 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.EcosB2CORFHP (99% identity) | M.Eco12514ORF20600P | |
| 20605 | 73 aa hypothetical protein | |||
| 23510 | 162 aa hypothetical protein | |||
| 23515 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco12514ORF23515P |
| 23520 | LexA family transcriptional regulator | |||
| 21335 | translation inhibitor protein RaiA | |||
| ??? | M | M.EcoS6685ORFIP (100% identity) | M.Eco12514ORF21340P | |
| 8595 | 65 aa hypothetical protein | |||
| 8600 | M | M.EcoF6699ORFFP (100% identity) | M.Eco12514ORF8600P | |
| 8620 | 470 aa hypothetical protein | |||
| 1565 | multidrug DMT transporter | |||
| 1570 | V | V.SsoSE61DcmP (100% identity) | V.Eco12514DcmP | |
| 1575 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco12514DcmP |
| 1580 | hydrolase | |||
| 17700 | Fis family transcriptional regulator | |||
| 17705 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco12514ORF17705P |
| 17710 | 59 aa hypothetical protein | |||
| 9270 | cell division protein DamX | |||
| 9275 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco12514DamP |
| 9280 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | DEAD/DEAH box helicase | |||
| 5020 | R | SenHNK130MrrP (100% identity) | Eco12514MrrP | |
| 5025 | GTP-binding protein | |||