Escherichia coli 2013EL-1320-c5 |
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Putative Escherichia coli 2013EL-1320-c5 RM systems
Ref: Pattabiraman,V. and Bopp,C.A. unpublished
REBASE ref # 18752
GenBank #: JPUD00000000
REBASE acronym: Eco1320
Org_num: 14515
All begin JQ59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.EcoYJ6ORFCP (100% identity) | M.Eco1320ORFAP | |
| 19160 | restriction methylase | |||
| 12245 | 112 aa hypothetical protein | |||
| 12255 | R | Eco1319ORF20890P (100% identity) | Eco1320ORF12265P | |
| 12260 | S | S.Eco1319ORF20890P (100% identity) | S.Eco1320ORF12265P | |
| 12265 | M | M.EcoETEC6ORF22405P (100% identity) | M.Eco1320ORF12265P | |
| 12270 | 621 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22730 | 73 aa hypothetical protein | |||
| 22735 | M | M.Sso8ORF23800P (100% identity) | M.Eco1320ORF22735P | |
| 22740 | transposase | |||
| 21455 | 65 aa hypothetical protein | |||
| 21460 | M | M.EcoS0786ORF24765P (100% identity) | M.Eco1320ORF21460P | |
| 21475 | 92 aa hypothetical protein | |||
| 19635 | 67 aa hypothetical protein | |||
| 19640 | M | M.Eco1319ORF20745P (100% identity) | M.Eco1320ORF19640P | |
| 19645 | holin | |||
| 19240 | 162 aa hypothetical protein | |||
| 19245 | M | M.EcoM166ORF2575P (66% identity) | GATC | M.Eco1320ORF19245P |
| 17400 | 162 aa hypothetical protein | |||
| 17405 | M | 145 aa hypothetical protein | GATC | M.Eco1320ORF17405P |
| 19170 | mcrBC 5-methylcytosine restriction system | |||
| 19175 | R | SflSTLE4ORF19250P (100% identity) | Eco1320ORF19175P | |
| 19180 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 2315 | hydrolase | |||
| 2320 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco1320DcmP |
| 2325 | V | V.SsoSE61DcmP (100% identity) | V.Eco1320DcmP | |
| 5365 | Fis family transcriptional regulator | |||
| 5370 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1320ORF5370P |
| 5375 | 59 aa hypothetical protein | |||
| 8105 | cell division protein DamX | |||
| 8110 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1320DamP |
| 8115 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19160 | restriction methylase | |||
| 19165 | R | EcoYJ6McrBP (100% identity) | Eco1320McrBP | |
| 19170 | R | EcoYJ6McrCP (100% identity) | Eco1320McrCP | |
| 19175 | restriction endonuclease | |||