Escherichia coli UCD_JA62_pb |
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Putative Escherichia coli UCD_JA62_pb RM systems
Ref: Coil,D.A. et al. unpublished
REBASE ref # 18751
Contig set: 5,559,237 bp
GenBank #: JMJC00000000 (NZ_JMJC00000000)
REBASE acronym: EcoJA62P
Org_num: 14501
All begin EH63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1525 | 260 aa hypothetical protein | |||
| 1530 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoJA62PIP |
| 1535 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoJA62PI |
| 1540 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoJA62PI |
| 1545 | 156 aa hypothetical protein | |||
| 3310 | pseudogene | |||
| 3315 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoJA62PII |
| 3320 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoJA62PII |
| 3325 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoJA62PIIP |
| 3330 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17610 | M | M.EcoEC0557ORF25170P (71% identity) | M.EcoJA62PORF17610P | |
| 17615 | 73 aa hypothetical protein | |||
| 25850 | 308 aa hypothetical protein | |||
| 25855 | M | M.UbapRSB107ORFAP (100% identity) | M.EcoJA62PORF25855P | |
| 25860 | 73 aa hypothetical protein | |||
| 10850 | 308 aa hypothetical protein | |||
| 10855 | M | M.Sfl0030ORFCP (100% identity) | M.EcoJA62PORF10855P | |
| 10860 | 73 aa hypothetical protein | |||
| 14775 | 92 aa hypothetical protein | |||
| 14790 | M | M.EcosS9ORF10680P (100% identity) | M.EcoJA62PORF14790P | |
| 14795 | 65 aa hypothetical protein | |||
| 21305 | carbon starvation induced protein | |||
| 21310 | M | M.Ecoi64ORF2425P (100% identity) | M.EcoJA62PORF21310P | |
| 21315 | ATPase AAA | |||
| 21380 | 162 aa hypothetical protein | |||
| 21385 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoJA62PORF21385P |
| 21390 | LexA family transcriptional regulator | |||
| 21420 | 67 aa hypothetical protein | |||
| 21425 | M | M.Sso63633ORF22290P (100% identity) | M.EcoJA62PORF21425P | |
| 21430 | holin | |||
| 3660 | restriction endonuclease | |||
| 3665 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoJA62PORF3670P |
| 3670 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoJA62PORF3670P |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoJA62PORF3670P |
| 3680 | transposase | |||
| 17025 | DNA-binding protein | |||
| 17030 | M | M.KpnYN1ORFGP (89% identity) | M.EcoJA62PORF17030P | |
| 17035 | 71 aa hypothetical protein | |||
| 25210 | hydrolase | |||
| 25215 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoJA62PDcmP |
| 25220 | V | V.SflC32DcmP (74% identity) | V.EcoJA62PDcmP | |
| 25225 | multidrug DMT transporter | |||
| 9250 | cell division protein DamX | |||
| 9255 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoJA62PDamP |
| 9260 | ribulose-phosphate 3-epimerase | |||
| 9850 | 59 aa hypothetical protein | |||
| 9855 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoJA62PORF9855P |
| 9860 | Fis family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3650 | glycosyl transferase | |||
| 3655 | R | EcosS3McrBP (100% identity) | EcoJA62PMcrBP | |
| 3660 | R | EcosS9McrCP (100% identity) | EcoJA62PMcrCP | |
| 3665 | restriction endonuclease | |||