Escherichia coli UCD_JA03_pb |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli UCD_JA03_pb RM systems
Ref: Coil,D.A. et al. unpublished
REBASE ref # 18751
Contig set: 5,411,202 bp
GenBank #: JMIZ00000000 (NZ_JMIZ00000000)
REBASE acronym: EcoJA03P
Org_num: 14498
All begin EH66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11690 | metal-dependent hydrolase | |||
| 11695 | R | Sen59ORF24615P (100% identity) | GATGNNNNNCTG | EcoJA03PIP |
| 11700 | S | S.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | S.EcoJA03PI |
| 11705 | M | M.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | M.EcoJA03PI |
| 11710 | 73 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1700 | 59 aa hypothetical protein | |||
| 1705 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoJA03PORF1705P |
| 1710 | Fis family transcriptional regulator | |||
| 25940 | 73 aa hypothetical protein | |||
| 25945 | M | M.StyR64ORFAP (100% identity) | M.EcoJA03PORF25945P | |
| 25950 | 308 aa hypothetical protein | |||
| 1275 | 125 aa hypothetical protein | |||
| 1295 | M | M.EcoJA03ORF5490P (100% identity) | M.EcoJA03PORF1295P | |
| 1300 | DNA recombinase | |||
| 14645 | Presumed portal vertex protein | |||
| 14650 | M | M.Ecoww7ORF20P (100% identity) | TGGCCA | M.EcoJA03PII |
| 14655 | R | EcoLR24ORF25750P (100% identity) | TGGCCA | EcoJA03PIIP |
| 14660 | replication protein A | |||
| 9000 | hydrolase | |||
| 9005 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoJA03PDcm |
| 9010 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoJA03PDcmP |
| 9015 | multidrug DMT transporter | |||
| 25175 | cell division protein DamX | |||
| 25180 | M | M.EcoJA03DamP (100% identity) | GATC | M.EcoJA03PDamP |
| 25185 | ribulose-phosphate 3-epimerase | |||