Escherichia coli UCD_JA23 |
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Putative Escherichia coli UCD_JA23 RM systems
Ref: Coil,D. et al. unpublished
REBASE ref # 18751
Contig set: 4,938,428 bp
GenBank #: JFFL00000000 (NZ_JFFL00000000)
REBASE acronym: EcoJA23
Org_num: 14489
All begin BU67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 720 | 452 aa hypothetical protein | |||
| 725 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoJA23ORF730P |
| ??? | M | M.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | M.EcoJA23ORF730P |
| 735 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoJA23ORF730P |
| 740 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7095 | 59 aa hypothetical protein | |||
| 7100 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoJA23ORF7100P |
| 7105 | Fis family transcriptional regulator | |||
| 6470 | ribulose-phosphate 3-epimerase | |||
| 6475 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoJA23DamP |
| 6480 | cell division protein DamX | |||
| 18185 | multidrug DMT transporter | |||
| 18190 | V | V.SflC32DcmP (74% identity) | V.EcoJA23DcmP | |
| 18195 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoJA23DcmP |
| 18200 | hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 955 | 233 aa hypothetical protein | |||
| 965 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoJA23ORF965P |
| 970 | R | EcoJA23PIIP (99% identity) | CACAG | EcoJA23ORF965P |
| 980 | integrase | |||