Escherichia coli UCD_JA17 |
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Putative Escherichia coli UCD_JA17 RM systems
Ref: Coil,D. et al. unpublished
REBASE ref # 18751
Contig set: 5,064,765 bp
GenBank #: JFFK00000000 (NZ_JFFK00000000)
REBASE acronym: EcoJA17
Org_num: 14488
All begin BU66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10855 | endoribonuclease SymE | |||
| 10860 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoJA17ORF10865P |
| ??? | M | M.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | M.EcoJA17ORF10865P |
| 10870 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoJA17ORF10865P |
| 10875 | 452 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6225 | 146 aa hypothetical protein | |||
| ??? | M | M.EcoleORFAP (100% identity) | GATC | M.EcoJA17ORFAP |
| 6235 | protein ninE | |||
| 16855 | cell division protein DamX | |||
| 16860 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoJA17DamP |
| 16865 | ribulose-phosphate 3-epimerase | |||
| 5455 | 140 aa hypothetical protein | |||
| 5475 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoJA17ORF5475P | |
| 5480 | 329 aa hypothetical protein | |||
| 13925 | Fis family transcriptional regulator | |||
| 13930 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoJA17ORF13930P |
| 13935 | 59 aa hypothetical protein | |||
| 19425 | multidrug DMT transporter | |||
| 19430 | V | V.EcosC25DcmP (100% identity) | V.EcoJA17DcmP | |
| 19435 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoJA17DcmP |
| 19440 | hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9455 | 233 aa hypothetical protein | |||
| 9465 | M | M.EcoJA17PII (100% identity) | CACAG | M.EcoJA17ORF9465P |
| 9470 | R | EcoUTI89IP (100% identity) | CACAG | EcoJA17ORF9465P |
| 9480 | integrase | |||