Methanoplanus limicola DSM 2279 |
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Putative Methanoplanus limicola DSM 2279 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 18299
Complete sequence: 3,200,946 bp
GenBank #: CM001436
REBASE acronym: Mli2279
Org_num: 14009
All begin Metlim_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 595 | 276 aa hypothetical protein | |||
| 596 | M | M.Men3599ORF11255P (94% identity) | M.Mli2279ORF596P | |
| 597 | 134 aa hypothetical protein | |||
| 598 | S | S3.Men3599ORF11255P (61% identity) | S.Mli2279ORF596P | |
| 599 | transcriptional regulator | |||
| 600 | R | Men3599ORF11255P (93% identity) | Mli2279ORF596P | |
| 601 | 82 aa hypothetical protein | |||
| 2206 | 327 aa hypothetical protein | |||
| 2207 | R | Mpe11571ORF1674P (85% identity) | Mli2279ORF2214P | |
| 2208 | 192 aa hypothetical protein | |||
| 2209 | 133 aa hypothetical protein | |||
| 2210 | S | S.AmeQORF3304P (29% identity) | S.Mli2279ORF2214P | |
| 2211 | 148 aa hypothetical protein | |||
| 2212 | protein of unknown function DUF1016 | |||
| 2213 | protein of unknown function DUF1016 | |||
| 2214 | M | M.Man21220ORF11370P (90% identity) | M.Mli2279ORF2214P | |
| 2215 | transcriptional regulator | |||
| 2351 | Uncharacterized protein family UPF0150 | |||
| 2352 | M | M.Man21220ORF870P (86% identity) | M.Mli2279ORF2352P | |
| 2353 | 47 aa hypothetical protein | |||
| 2354 | Uncharacterized protein family UPF0150 | |||
| 2355 | YcfA family protein | |||
| 2356 | transcriptional regulator | |||
| 2357 | S | S.Cba2141ORFAP (31% identity) | S.Mli2279ORF2352P | |
| 2358 | 773 aa hypothetical protein | |||
| 2359 | R | Mor3596ORF8540P (75% identity) | Mli2279ORF2352P | |
| 2360 | 64 aa hypothetical protein | |||
| 2536 | 77 aa hypothetical protein | |||
| 2537 | S | S2.Mli2279ORF2537P (20% identity) | S1.Mli2279ORF2537P | |
| 2538 | transposase | |||
| 2539 | 164 aa hypothetical protein | |||
| 2540 | 118 aa hypothetical protein | |||
| 2541 | S | S.Pae37ORF6067P (43% identity) | S2.Mli2279ORF2537P | |
| 2542 | 73 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 410 | helicase domain-containing protein | |||
| 411 | M | EadM828ORFHP (29% identity) | M.Mli2279ORF411P | |
| 412 | 401 aa hypothetical protein | |||
| 534 | small GTP-binding protein | |||
| 535 | R | Men3599ORF11580P (93% identity) | CTGCAG | Mli2279ORF536P |
| 536 | M | M.Men3599ORF11580P (91% identity) | CTGCAG | M.Mli2279ORF536P |
| 537 | RNA methyltransferase fusion protein | |||
| 1005 | 281 aa hypothetical protein | |||
| 1006 | M | M.Men3599ORF6670P (83% identity) | GTAC | M.Mli2279ORF1006P |
| 1007 | Tryptophan synthase beta chain | |||
| 1118 | 209 aa hypothetical protein | |||
| 1119 | M | M.Man21220ORF10030P (60% identity) | GATC | M.Mli2279ORF1119P |
| 1120 | 449 aa hypothetical protein | |||
| 1539 | 873 aa Conserved hypothetical protein CHP02687 | |||
| 1540 | RM | Bin551ORF23075P (22% identity) | Mli2279ORF1540P | |
| 1541 | protein of unknown function DUF1016 | |||
| 1543 | 101 aa hypothetical protein | |||
| 1544 | RM | MhuORF1895AP (62% identity) | Mli2279ORF1544P | |
| 1545 | 1180 aa hypothetical protein | |||
| 1892 | 37 aa hypothetical protein | |||
| 1893 | M | M.Mho15517ORFCP (62% identity) | M.Mli2279ORF1893P | |
| 1894 | Uncharacterized protein family UPF0150 | |||
| 2160 | protein of unknown function DUF1016 | |||
| 2161 | RM | Men3599ORF14325P (79% identity) | Mli2279ORF2161P | |
| 2162 | 1155 aa hypothetical protein | |||
| 2221 | 205 aa hypothetical protein | |||
| 2222 | M | M.Men3599ORF3315P (76% identity) | M.Mli2279ORF2222P | |
| 2223 | 30S ribosomal protein S27ae | |||
| 2952 | PKD domain containing protein | |||
| 2953 | M | M.Men3599ORF9200P (84% identity) | GGNCC | M.Mli2279ORF2953P |
| 2954 | R | Men3599ORF9200P (83% identity) | GGWCC | Mli2279ORF2953P |
| 2955 | 71 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2247 | 116 aa hypothetical protein | |||
| 2248 | R | AspALC3ORF10915P (43% identity) | Mli2279ORF2248P | |
| 2249 | 97 aa hypothetical protein | |||