Escherichia coli S6400 |
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Putative Escherichia coli S6400 RM systems
Ref: Hazen,T.H. et al. Genome Announc 2 (3), e00582-14 (2014)
REBASE ref # 17826
Contig set: 5,008,742 bp
GenBank #: JICE00000000 (NZ_JICE00000000)
REBASE acronym: EcoS6400
Org_num: 13337
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | 447 aa hypothetical protein CR517_25310 | |||
| ??? | M | M.SflFF71ORF17365P (100% identity) | M.EcoS6400ORFAP | |
| ??? | S | S.EcoTrh52ORF17850P (99% identity) | S.EcoS6400ORFAP | |
| ??? | M | M.EcoBU03ORF13275P (100% identity) | M.EcoS6400ORFDP | |
| ??? | R | EcoTrh52ORF18120P (99% identity) | EcoS6400ORFDP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Sen143ORF26480P (100% identity) | M.EcoS6400ORFMP | |
| ??? | M | M.Eco40403ORF123P (100% identity) | M.EcoS6400ORFLP | |
| ??? | M | M.SflLIN17ORF17405P (100% identity) | M.EcoS6400ORFKP | |
| ??? | M | M.Ema777ORF7665P (99% identity) | GATC | M.EcoS6400ORFEP |
| ??? | R | EcoNT1W25ORFGP (99% identity) | EcoS6400ORFPP | |
| ??? | M | M.Eco4991ORFDP (100% identity) | GATC | M.EcoS6400ORFIP |
| ??? | M | M.Sso90ORF15820P (99% identity) | GATC | M.EcoS6400ORFJP |
| ??? | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS6400DcmP |
| ??? | V | V.SflC32DcmP (74% identity) | V.EcoS6400DcmP | |
| ??? | M | M.EcoEC12ORF830P (100% identity) | M.EcoS6400ORFHP | |
| ??? | M | M.Eco10089ORF2937P (100% identity) | M.EcoS6400ORFGP | |
| ??? | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS6400ORFBP |
| ??? | M | M.EcoS6685ORFLP (97% identity) | M.EcoS6400ORFCP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | EcoTrh52McrBP (100% identity) | EcoS6400McrBP | |
| ??? | R | EcoTrh52McrCP (100% identity) | EcoS6400McrCP | |
| ??? | 715 aa hypothetical protein BvCmsKSNP101_02427 | |||
| ??? | R | EcoTrh52GmrDP (100% identity) | EcoS6400GmrSDP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS6400ORFOP |
| ??? | M | M.EcoPM7ORF21570P (97% identity) | GATC | M.EcoS6400ORFFP |