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Putative Escherichia coli Nissle 1917 RM systems
Ref: Liang,C. et al. unpublished
REBASE ref # 15798
Complete sequence: 5,441,200 bp
GenBank #: CP007799
REBASE acronym: Eco1917
Org_num: 10459
All begin ECOLIN_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
24165 | endoribonuclease SymE | |||
24170 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco1917ORF24180P |
24175 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco1917ORF24180P |
24180 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco1917ORF24180P |
24185 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
6550 | 146 aa hypothetical protein | |||
??? | M | M.EcoleORFAP (100% identity) | GATC | M.Eco1917ORF6555P |
6560 | protein ninE | |||
10190 | holin | |||
10195 | M | M.EcoZE21ORF10265P (100% identity) | M.Eco1917ORF10195P | |
10200 | 63 aa hypothetical protein | |||
10235 | crossover junction endodeoxyribonuclease | |||
10240 | M | M.EcoZE21ORF10305P (100% identity) | M.Eco1917ORF10240P | |
10245 | GntR family transcriptional regulator | |||
10775 | multidrug DMT transporter | |||
10780 | V | V.EcosC25DcmP (100% identity) | V.Eco1917DcmP | |
10785 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1917DcmP |
10790 | hydrolase | |||
18090 | Fis family transcriptional regulator | |||
18095 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1917ORF18095P |
18100 | 59 aa hypothetical protein | |||
18705 | ribulose-phosphate 3-epimerase | |||
18710 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1917DamP |
18715 | cell division protein DamX | |||
26285 | restriction endonuclease | |||
26290 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1917ORF26295P |
26295 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco1917ORF26295P |
??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco1917ORF26295P |
26305 | transposase |