Escherichia coli ST540AN |
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Putative Escherichia coli ST540AN RM systems
Ref: Xavier,B.B. et al. Genome Announc 2 (2), e00239-14 (2014)
REBASE ref # 17449
Complete sequence: 4,875,682 bp
GenBank #: CP007391
REBASE acronym: Eco540AN
Org_num: 12982
All begin CF61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7870 | transposase | |||
| 7875 | R | Ror24150ORF17255P (100% identity) | GGANNNNNCTC | Eco540ANIIP |
| 7880 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Eco540ANII |
| 7885 | M | M.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | M.Eco540ANII |
| 7890 | chromosome partitioning protein ParB | |||
| 26145 | antitoxin | |||
| 26150 | M | M.Eco540I (100% identity) | GAANNNNNNRTCG | M.Eco540ANI |
| 26155 | S | S.Eco751ORF26970P (100% identity) | GAANNNNNNRTCG | S.Eco540ANI |
| 26165 | R | Eco540IP (100% identity) | GAANNNNNNRTCG | Eco540ANIP |
| 26170 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3130 | cell division protein DamX | |||
| 3140 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco540ANDamP |
| 3145 | ribulose-phosphate 3-epimerase | |||
| 3880 | 59 aa hypothetical protein | |||
| 3885 | M | M.EcoC0320ORF2480P (100% identity) | ATGCAT | M.Eco540ANORF3885P |
| 3890 | Fis family transcriptional regulator | |||
| 9585 | pseudogene | |||
| 9590 | M | M.Eco540ORF21180P (100% identity) | GATC | M.Eco540ANORF9590P |
| 9595 | exonuclease | |||
| 12410 | hydrolase | |||
| 12415 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco540ANDcmP |
| 12420 | V | V.EcosEC7DcmP (100% identity) | V.Eco540ANDcmP | |
| 12425 | multidrug DMT transporter | |||
| 20300 | 281 aa hypothetical protein | |||
| 20305 | M | M.Ecoww7ORF22075P (100% identity) | GATC | M.Eco540ANORF20305P |
| 20310 | 146 aa hypothetical protein | |||
| 23695 | holin | |||
| 23700 | M | M.Eco540ORF6595P (100% identity) | M.Eco540ANORF23700P | |
| 23710 | 67 aa hypothetical protein | |||
| 26415 | 308 aa hypothetical protein | |||
| 26430 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco540ANORF26430P | |
| 26435 | 73 aa hypothetical protein | |||