Escherichia coli O145:H28 RM12581 |
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Putative Escherichia coli O145:H28 RM12581 RM systems
Ref: Cooper,K.K. et al. unpublished
REBASE ref # 16989
| Sequence length: | GenBank #: | |
| Chromosome: | 5,585,611 bp | CP007136 |
| plasmid pO145-12581: | 87,120 bp | CP007138 |
REBASE acronym: Eco12581
Org_num: 12719
All begin ECRM12581_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11990 | IS600 orfA | |||
| 11995 | R | EcoSO173ORF28895P (89% identity) | GATGNNNNNNTAC | Eco12581ORF12010P |
| 12000 | metal-binding protein related to the | |||
| 12005 | S | S.EcoSO173ORF28895P (100% identity) | GATGNNNNNNTAC | S.Eco12581ORF12010P |
| ??? | M | M.EcoE115ORF2574P (100% identity) | GATGNNNNNNTAC | M.Eco12581ORF12010P |
| 12015 | IS629 orfA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4025 | gene 54 protein | |||
| 4030 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco12581ORF17190P |
| 4035 | Phage NinB DNA recombination | |||
| 10085 | 39 aa hypothetical protein | |||
| 10090 | M | M.EcoDEC11CORF5871P (100% identity) | M.Eco12581ORF10090P | |
| 10095 | 65 aa unknown protein encoded by prophage CP-933O | |||
| 12420 | Permease of the drug/metabolite transporter | |||
| 12425 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco12581DcmP |
| 12430 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco12581Dcm |
| 12435 | metal-dependent phosphohydrolase | |||
| 13295 | Phage NinF | |||
| ??? | M | M.EcoPM7ORF21570P (100% identity) | GATC | M.Eco12581ORF13300P |
| 13305 | Phage NinB DNA recombination | |||
| 15615 | repressor protein CI | |||
| 15620 | M | M.EcoE2863ORF2986P (100% identity) | CTGCAG | M.Eco12581I |
| 15625 | R | EcoF690ORF30660P (100% identity) | CTGCAG | Eco12581IP |
| 15630 | GepA protein | |||
| 15730 | 118 aa hypothetical protein | |||
| 15735 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco12581ORF15735P |
| 15740 | 70 aa hypothetical protein | |||
| 20805 | DNA-binding protein Fis | |||
| 20810 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco12581ORF20810P |
| 20815 | periplasmic protein | |||
| 21350 | Ribulose-phosphate 3-epimerase | |||
| 21355 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco12581DamP |
| 21360 | Inner membrane protein DamX | |||
| 24605 | 150 aa hypothetical protein | |||
| 24610 | M | M.SflFF35ORF20P (100% identity) | GGCC | M.Eco12581ORF24610P |
| 24615 | 330 aa hypothetical protein | |||
| 25525 | 38 aa hypothetical protein | |||
| ??? | M | M.EcoSO179ORF27060P (100% identity) | M.Eco12581ORF25530P | |
| 25535 | 166 aa hypothetical protein | |||
| 25600 | 83 aa hypothetical protein | |||
| 25605 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.Eco12581ORF25605P |
| 25610 | phage repressor protein | |||
| 27240 | ATP-dependent helicase | |||
| 27245 | RM | EcoSO172ORF1005P (100% identity) | Eco12581ORF27245P | |
| 27250 | IS629 orfA | |||
| 27255 | Transposase | |||
| ??? | RM | primase-helicase zinc-binding domain-containing protein | Eco12581ORF27260P | |
| plasmid pO145-12581 | ||||
| 29135 | 41 aa hypothetical protein | |||
| 29140 | M | M.EcopO26ORF185P (100% identity) | M.Eco12581ORF29140P | |
| 29145 | cytoplasmic protein | |||