Escherichia coli LCT-EC52 |
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Putative Escherichia coli LCT-EC52 RM systems
Ref: Zhang,D. et al. Genome Announc 2 (2), e00081-14 (2014)
REBASE ref # 17383
Contig set: 5,103,280 bp
GenBank #: ANHT00000000 (NZ_ANHT00000000)
REBASE acronym: EcoEC52
Org_num: 12702
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | restriction endonuclease | |||
| ??? | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoEC52ORFEP |
| ??? | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoEC52ORFEP |
| ??? | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoEC52ORFEP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoEC52ORFCP |
| ??? | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoEC52ORFCP |
| ??? | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoEC52ORFCP |
| ??? | 428 aa hypothetical protein | |||
| ??? | M | M.EcoleORFAP (100% identity) | GATC | M.EcoEC52ORFDP |
| ??? | M | M.EcoZLWTORF24570P (100% identity) | GATC | M.EcoEC52ORFFP |
| ??? | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoEC52DcmP |
| ??? | V | V.EcoleDcmP (100% identity) | V.EcoEC52DcmP | |
| ??? | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEC52ORFAP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | |||
| ??? | R | EcosS9McrCP (100% identity) | EcoEC52McrCP | |
| ??? | R | EcosS9McrBP (93% identity) | EcoEC52McrBP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEC52ORFBP |