Escherichia coli O145:H28 RM13516 |
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Putative Escherichia coli O145:H28 RM13516 RM systems
Ref: Cooper,K.K. et al. unpublished
REBASE ref # 16989
Complete sequence: 5,402,276 bp
GenBank #: CP006262
REBASE acronym: Eco13516
Org_num: 12043
All begin ECRM13516_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2384 | metal-dependent hydrolase | |||
| 2385 | R | Type I restriction-modification system, | Eco13516ORF2385P | |
| 2386 | 354 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 766 | Phage NinB DNA recombination | |||
| 767 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco13516ORF767P |
| 768 | 590 aa hypothetical protein | |||
| 1946 | 617 aa hypothetical protein | |||
| 1948 | M | M.EcoTWORF1742P (100% identity) | M.Eco13516ORF1948P | |
| 1949 | 106 aa hypothetical protein | |||
| 2316 | Shiga-like toxin II subunit A precursor | |||
| 2320 | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco13516ORF2320P | |
| 2321 | 46 aa hypothetical protein | |||
| 2442 | Permease of the drug/metabolite transporter | |||
| 2443 | V | V.SsoSE61DcmP (100% identity) | V.Eco13516DcmP | |
| 2444 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco13516DcmP |
| 2445 | metal-dependent phosphohydrolase | |||
| 2810 | Crossover junction endodeoxyribonuclease | |||
| 2811 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco13516ORF2811P |
| 2812 | 44 aa hypothetical protein | |||
| 3349 | 275 aa hypothetical protein | |||
| 3350 | M | M.EcoSO173ORF7065P (100% identity) | GATC | M.Eco13516ORF3350P |
| 3351 | Phage NinB DNA recombination | |||
| 4018 | DNA-binding protein Fis | |||
| 4019 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco13516ORF4019P |
| 4020 | periplasmic protein | |||
| 4126 | Ribulose-phosphate 3-epimerase | |||
| 4127 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13516DamP |
| 4128 | Inner membrane protein DamX | |||