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Putative Lactobacillus fermentum 3872 RM systems
Ref: Karlyshev,A.V. et al. unpublished
REBASE ref # 16750
Sequence length: | GenBank #: | |
Chromosome: | 2,207,008 bp | AVCT00000000 (NZ_AVCT00000000) |
Chromosome: | 2,297,851 bp | CP011536 |
REBASE acronym: Lfe3872
Org_num: 11711
All begin N573_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8910 | transposase IS256 | |||
8915 | R | LplBC015ORF16595P (98% identity) | Lfe3872ORF8920P | |
8920 | M | M.Lbr15fORF9780P (99% identity) | M.Lfe3872ORF8920P | |
8925 | S | S.LarL12ORF14885P (67% identity) | S.Lfe3872ORF8920P | |
8930 | 98 aa hypothetical protein | |||
Chromosome | ||||
4210 | transposase | |||
4215 | S | S.LarL12ORF14885P (67% identity) | S.Lfe3872ORF8920P | |
4220 | M | M.Lbr15fORF9780P (99% identity) | M.Lfe3872ORF8920P | |
4225 | R | LplBC015ORF16595P (98% identity) | Lfe3872ORF8920P | |
4230 | transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6755 | RM | Lfe3872ORF2130P (97% identity) | Lfe3872ORF6755P | |
6760 | integrase | |||
6760 | integrase | |||
6765 | RM | Lfe3872ORF2120P (100% identity) | Lfe3872ORF6765P | |
6770 | 1230 aa hypothetical protein | |||
5410 | terminase | |||
5415 | M | M.Lfe179ORF8525P (100% identity) | M.Lfe3872ORF5415P | |
5420 | 206 aa hypothetical protein | |||
Chromosome | ||||
2115 | ATPase family protein | |||
2120 | RM | Lfe3872ORF6765P (100% identity) | Lfe3872ORF2120P | |
2125 | integrase | |||
2125 | integrase | |||
2130 | RM | Lfe3872ORF6755P (97% identity) | Lfe3872ORF2130P | |
2135 | cytoplasmic protein | |||
9265 | terminase | |||
9270 | M | M.Lfe179ORF8525P (100% identity) | M.Lfe3872ORF5415P | |
9275 | virulence-related protein CDS |