Sphingobium chinhatense IP26 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Sphingobium chinhatense IP26 RM systems
Ref: Niharika,N. et al. Genome Announc 1 (4), e00680-13 (2013)
REBASE ref # 16538
Contig set: 5,847,843 bp
GenBank #: AUDA00000000 (NZ_AUDA00000000)
REBASE acronym: SchIP26
Org_num: 11302
All begin M527_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 28695 | 155 aa hypothetical protein | |||
| 28700 | M | M.SspPO4ORF3475P (100% identity) | M.SchIP26ORF28700P | |
| 28705 | S | S.SspPO4ORF3475P (100% identity) | S.SchIP26ORF28700P | |
| 28710 | R | SluF2ORF19275P (100% identity) | SchIP26ORF28700P | |
| 28715 | 335 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21185 | M | M.SluF2ORF21240P (85% identity) | GCCCGCC | M.SchIP26ORF21185P |
| 10160 | ArsR family transcriptional regulator | |||
| 10165 | M | M.SspBHCAORFCP (100% identity) | GANTC | M.SchIP26ORF10165P |
| 10170 | dihydropteroate synthase | |||
| 16050 | 60 aa hypothetical protein | |||
| 16055 | M | M.SluF2ORF4260P (100% identity) | GGCGCC | M.SchIP26ORF16055P |
| 16060 | R | SluF2ORF4260P (100% identity) | GGCGCC | SchIP26ORF16055P |
| 16065 | V | V.Cde65ORF9361P (51% identity) | V.SchIP26ORF16055P | |
| 16070 | 38 aa hypothetical protein | |||
| 17965 | ATPase AAA | |||
| 17970 | M | M.SspPO4ORF17560P (100% identity) | M.SchIP26ORF17970P | |
| 17975 | ATPase | |||
| 6940 | 236 aa hypothetical protein | |||
| 6945 | M | M.SspPO4ORF9460P (100% identity) | M.SchIP26ORF6945P | |
| 6950 | integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23705 | 441 aa hypothetical protein | |||
| 23710 | R | SspRSMSORF17075P (97% identity) | SchIP26ORF23720P | |
| 23715 | 622 aa hypothetical protein | |||
| 23720 | M | M.SluF2ORF15895P (76% identity) | M.SchIP26ORF23720P | |
| 23725 | M | M.SspRSMSORF17075P (17% identity) | M.SchIP26ORF23725P | |
| 23730 | 76 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 28710 | type I deoxyribonuclease HsdR | |||
| 28715 | R | SspPO4MrrP (100% identity) | SchIP26MrrP | |
| 28720 | 71 aa hypothetical protein | |||