Escherichia coli O08 |
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Putative Escherichia coli O08 RM systems
Ref: Rojas,T.C. et al. Genome Announc 1 (2), E0011013 (2013)
REBASE ref # 15815
Contig set: 5,084,721 bp
GenBank #: AOGM00000000 (NZ_AOGM00000000)
REBASE acronym: EcoO08
Org_num: 10451
All begin C202_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5414 | 27 aa hypothetical protein | |||
| 5419 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoO08ORF5419P |
| 5424 | 53 aa hypothetical protein | |||
| 22410 | 226 aa hypothetical protein | |||
| 22415 | M | M.SspS13ORF1655P (100% identity) | M.EcoO08ORF22415P | |
| 22420 | replication gene A protein | |||
| 9512 | DMT superfamily transporter inner membrane | |||
| 9517 | V | V.SsoSE61DcmP (100% identity) | V.EcoO08DcmP | |
| 9522 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoO08DcmP |
| 9527 | hydrolase | |||
| 24463 | 73 aa hypothetical protein | |||
| 24468 | M | M.EcoC9777ORF4731P (99% identity) | M.EcoO08ORF24468P | |
| 24473 | 43 aa hypothetical protein | |||
| 16566 | ribulose-phosphate 3-epimerase | |||
| 16571 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoO08DamP |
| 16576 | 428 aa hypothetical protein | |||
| 16051 | DNA-binding protein Fis | |||
| 16056 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.EcoO08ORF16056P |
| 16061 | 59 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20406 | maturation control protein | |||
| 20411 | R | Sen68045ORF16165P (100% identity) | AGACC | EcoO08ORF20416P |
| ??? | M | M.SenSL0052ORF25975P (99% identity) | AGACC | M.EcoO08ORF20416P |
| 20421 | regulatory protein | |||