Escherichia coli TW14301 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli TW14301 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,298,453 bp
GenBank #: AKME00000000 (NZ_AKME00000000)
REBASE acronym: Eco14301
Org_num: 10458
All begin ECTW14301_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5502 | endoribonuclease symE | |||
| 5503 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco14301ORF5504P |
| 5504 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco14301ORF5504P |
| 5505 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco14301ORF5504P |
| 5506 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1821 | 65 aa hypothetical protein | |||
| 1822 | M | M.EcoNE92ORF14960P (100% identity) | M.Eco14301ORF1822P | |
| 1825 | 45 aa hypothetical protein | |||
| 2830 | antirepressor | |||
| 2831 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco14301ORF2831P |
| 2832 | ninB protein | |||
| 5184 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco14301ORF5185P | |
| 5187 | 116 aa hypothetical protein | |||
| 5591 | 41 aa hypothetical protein | |||
| 5592 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco14301ORF5592P | |
| 5593 | 73 aa hypothetical protein | |||
| 271 | gamma-glutamyl phosphate reductase | |||
| ??? | R | Ecos32ORF15460P (100% identity) | GCCGGC | Eco14301ORF274P |
| 274 | M | M.Ecos32ORF15460P (100% identity) | GCCGGC | M.Eco14301ORF274P |
| 275 | yeeU protein | |||
| 2698 | 306 aa hypothetical protein | |||
| 2699 | V | V.EcosPA8DcmP (100% identity) | V.Eco14301DcmP | |
| 2700 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco14301DcmP |
| 2701 | 231 aa hypothetical protein | |||
| 5450 | ATP-dependent helicase | |||
| 5451 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco14301ORF5451P |
| 4373 | ribulose-phosphate 3-epimerase | |||
| 4374 | M | DNA adenine methylase | GATC | M.Eco14301DamP |
| 4375 | protein damX | |||
| 4268 | DNA-binding protein fis | |||
| 4269 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco14301ORF4269P |
| 4270 | 59 aa hypothetical protein | |||