Escherichia coli TW09109 |
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Putative Escherichia coli TW09109 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,578,209 bp
GenBank #: AKLY00000000 (NZ_AKLY00000000)
REBASE acronym: Eco9109
Org_num: 10408
All begin ECTW09109_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 136 | endoribonuclease symE | |||
| 137 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco9109ORF138P |
| 138 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco9109ORF138P |
| 139 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco9109ORF138P |
| 140 | 87 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2039 | 65 aa hypothetical protein | |||
| 2040 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco9109ORF2040P | |
| 2043 | 380 aa hypothetical protein | |||
| 3216 | anti-termination protein | |||
| 3217 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco9109ORF3217P |
| 3218 | ninB protein | |||
| 1193 | 73 aa hypothetical protein | |||
| 1194 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco9109ORF1194P | |
| 1195 | 41 aa hypothetical protein | |||
| 3012 | 306 aa hypothetical protein | |||
| ??? | V | V.EcosPA8DcmP (100% identity) | V.Eco9109DcmP | |
| 3014 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco9109DcmP |
| 3015 | 231 aa hypothetical protein | |||
| 5690 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco9109ORFAP | |
| 5693 | 114 aa hypothetical protein | |||
| 4878 | ribulose-phosphate 3-epimerase | |||
| 4879 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9109DamP |
| 4880 | protein damX | |||
| 85 | ATP-dependent helicase | |||
| 86 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco9109ORF86P |
| 4721 | DNA-binding protein fis | |||
| 4722 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco9109ORF4722P |
| 4723 | 37 aa hypothetical protein | |||
| 3851 | transcriptional activator | |||
| ??? | M | M.EcoTT12BORF19880P (100% identity) | GATC | M.Eco9109ORF3852P |
| 3853 | 47 aa hypothetical protein | |||