Escherichia coli TW07945 |
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Putative Escherichia coli TW07945 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,364,059 bp
GenBank #: AKLU00000000 (NZ_AKLU00000000)
REBASE acronym: Eco7945
Org_num: 10404
All begin ECTW07945_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 62 | endoribonuclease symE | |||
| 63 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco7945ORF64P |
| 64 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco7945ORF64P |
| 65 | R | EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | Eco7945ORF64P |
| 66 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1940 | 65 aa hypothetical protein | |||
| ??? | M | M.EcosPA8ORF27255P (100% identity) | M.Eco7945ORF1942P | |
| 5612 | 41 aa hypothetical protein | |||
| 5613 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco7945ORF5613P | |
| 5614 | 73 aa hypothetical protein | |||
| 3436 | regulatory protein | |||
| 3437 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco7945ORF3437P |
| 3438 | 70 aa hypothetical protein | |||
| 3407 | prophage repressor CI | |||
| 3408 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco7945ORF3408P |
| 3409 | R | Sso1099IP (100% identity) | CTGCAG | Eco7945ORF3408P |
| 3410 | 37 aa hypothetical protein | |||
| 13 | ATP-dependent helicase | |||
| 14 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco7945ORF14P |
| 2806 | 306 aa hypothetical protein | |||
| 2807 | V | V.EcosPA8DcmP (100% identity) | V.Eco7945DcmP | |
| 2808 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco7945DcmP |
| 2809 | 231 aa hypothetical protein | |||
| 4514 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco7945DamP |
| 4516 | protein damX | |||
| 5352 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco7945ORF5353P | |
| 5355 | 116 aa hypothetical protein | |||
| 4407 | DNA-binding protein fis | |||
| 4408 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco7945ORF4408P |
| 4409 | 59 aa hypothetical protein | |||