Escherichia coli FRIK1985 |
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Putative Escherichia coli FRIK1985 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,540,670 bp
GenBank #: AKKZ00000000 (NZ_AKKZ00000000)
REBASE acronym: Eco1985
Org_num: 10400
All begin ECFRIK1985_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5917 | endoribonuclease symE | |||
| 5918 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1985ORF5919P |
| 5919 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco1985ORF5919P |
| 5920 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1985ORF5919P |
| 5921 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5865 | RM | 668 aa hypothetical protein | Eco1985ORF5865P | |
| 3143 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco1985ORF3143P |
| 3144 | ninB | |||
| 1967 | 76 aa hypothetical protein | |||
| 1968 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1985ORF1968P | |
| 1971 | 43 aa hypothetical protein | |||
| 5593 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1985ORF5594P | |
| 5596 | 109 aa hypothetical protein | |||
| 6017 | 41 aa hypothetical protein | |||
| 6018 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1985ORF6018P | |
| 6019 | 73 aa hypothetical protein | |||
| 6203 | transcriptional activator | |||
| ??? | M | M.EcoTT12BORF19880P (100% identity) | GATC | M.Eco1985ORF6204P |
| 6205 | 47 aa hypothetical protein | |||
| 5863 | ATP-dependent helicase | |||
| 5864 | RM | 959 aa hypothetical protein | Eco1985ORF5864P | |
| 3071 | 83 aa hypothetical protein | |||
| 3072 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco1985ORF3072P |
| 3073 | lexA DNA binding domain protein | |||
| 4767 | ribulose-phosphate 3-epimerase | |||
| 4768 | M | DNA adenine methylase | GATC | M.Eco1985DamP |
| 4769 | protein damX | |||
| 2954 | 306 aa hypothetical protein | |||
| 2955 | V | V.EcosPA8DcmP (100% identity) | V.Eco1985DcmP | |
| 2956 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1985DcmP |
| 2957 | 231 aa hypothetical protein | |||
| 4661 | DNA-binding protein fis | |||
| 4662 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1985ORF4662P |
| 4663 | 37 aa hypothetical protein | |||