Escherichia coli EC4448 |
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Putative Escherichia coli EC4448 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,492,781 bp
GenBank #: AKMM00000000 (NZ_AKMM00000000)
REBASE acronym: Eco4448
Org_num: 10414
All begin ECEC4448_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5687 | endoribonuclease symE | |||
| ??? | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco4448ORF5689P |
| 5689 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco4448ORF5689P |
| 5690 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco4448ORF5689P |
| 5691 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2887 | M | M.SflN97ORF15810P (96% identity) | GATC | M.Eco4448ORF2887P |
| 2888 | ninB protein | |||
| 3422 | M | M.EcoTWORF3263P (96% identity) | GATC | M.Eco4448ORF3422P |
| 3423 | 57 aa hypothetical protein | |||
| 1877 | lipoprotein | |||
| 1878 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco4448ORF1878P | |
| 1881 | 52 aa hypothetical protein | |||
| 6043 | yfcA protein | |||
| 6044 | M | M.UbapRSB107ORFAP (94% identity) | M.Eco4448ORF6044P | |
| 3456 | 55 aa hypothetical protein | |||
| 3457 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco4448ORF3457P |
| 3458 | 70 aa hypothetical protein | |||
| 2752 | 306 aa hypothetical protein | |||
| 2753 | V | V.EcosPA8DcmP (100% identity) | V.Eco4448DcmP | |
| 2754 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4448DcmP |
| 2755 | 231 aa hypothetical protein | |||
| 5895 | 41 aa hypothetical protein | |||
| 5896 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco4448ORF5896P | |
| 5897 | 73 aa hypothetical protein | |||
| 4539 | ribulose-phosphate 3-epimerase | |||
| 4540 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4448DamP |
| 4541 | protein damX | |||
| 5632 | ATP-dependent helicase | |||
| 5633 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco4448ORF5633P |
| 5360 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco4448ORF5361P | |
| 5363 | 109 aa hypothetical protein | |||
| 4432 | DNA-binding protein fis | |||
| 4433 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco4448ORF4433P |
| 4434 | 37 aa hypothetical protein | |||