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Putative Lactobacillus saerimneri 30a RM systems
Ref: Romano,A. et al. Genome Announc 1 (1), E00097-12 (2013)
REBASE ref # 15570
Contig set: 1,633,986 bp
GenBank #: ANAG00000000 (NZ_ANAG00000000)
REBASE acronym: Lsa30A
Org_num: 10298
All begin D271_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4479 | 90 aa hypothetical protein | |||
4484 | S | S1.LsaAR809ORF785P (39% identity) | S1.Lsa30AORF4484P | |
4489 | phage integrase | |||
4494 | S | restriction-modification enzyme type I | S2.Lsa30AORF4484P | |
4499 | type I restriction-modification system, M | |||
4494 | restriction-modification enzyme type I | |||
4499 | M | M.Lsa1AORF6180P (98% identity) | M.Lsa30AORF4499P | |
4504 | S | S.Cli100320ORF2710P (47% identity) | S1.Lsa30AORF4499P | |
4509 | R | Lsa1AORF6180P (98% identity) | Lsa30AORF4499P | |
4514 | S | S3.LsaC21ORF810P (60% identity) | S2.Lsa30AORF4499P | |
4519 | 185 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
7669 | PglZ domain-containing protein | |||
7674 | RM | LreTD1ORF8880P (58% identity) | Lsa30AORF7674P | |
7679 | 1218 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
7220 | 430 aa hypothetical protein | |||
7225 | R | Lsa1AORF2665P (98% identity) | Lsa30AORF7230P | |
??? | M | M.Lsa1AORF2665P (75% identity) | M.Lsa30AORF7230P | |
7235 | glutamine amidotransferase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
7659 | 571 aa hypothetical protein | |||
7664 | R | Lsa1AMrrP (93% identity) | Lsa30AMrrP | |
7669 | PglZ domain-containing protein | |||
7704 | 174 aa hypothetical protein | |||
7709 | R | Lsa1AORF1105P (99% identity) | Lsa30AORF7709P | |
7714 | exodeoxyribonuclease A |