Escherichia coli O104:H4 2009EL-2071 |
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Putative Escherichia coli O104:H4 2009EL-2071 RM systems
Ref: Johnson,S.L. et al. unpublished
REBASE ref # 14982
Complete sequence: 5,312,586 bp
GenBank #: CP003301
REBASE acronym: Eco2071
Org_num: 9470
All begin O3O_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3595 | 550 aa hypothetical protein | |||
| 3590 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco2071ORF3585P |
| 3585 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.Eco2071ORF3585P |
| 3580 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.Eco2071ORF3585P |
| 3575 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23520 | cell division protein DamX | |||
| 23515 | M | DNA adenine methylase | GATC | M.Eco2071DamP |
| 23510 | ribulose-phosphate 3-epimerase | |||
| 22995 | 59 aa hypothetical protein | |||
| 22990 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco2071ORF22990P |
| 22985 | global DNA-binding transcriptional dual | |||
| 15805 | hydrolase | |||
| 15800 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco2071DcmP |
| 15795 | V | V.SsoSE61DcmP (100% identity) | V.Eco2071DcmP | |
| 15790 | DMT superfamily transporter inner | |||
| 15260 | 164 aa hypothetical protein | |||
| 15255 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco2071ORF15255P |
| 15250 | LexA repressor | |||
| 11360 | 92 aa hypothetical protein | |||
| 11355 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco2071ORF11355P |
| 11350 | 65 aa hypothetical protein | |||
| 10525 | 617 aa hypothetical protein | |||
| 10520 | M | M.Eco8376ORF6915P (100% identity) | M.Eco2071ORF10520P | |
| 10515 | 65 aa hypothetical protein | |||
| 10445 | 228 aa hypothetical protein | |||
| 10440 | M | M.Eco8376ORF7000P (100% identity) | M.Eco2071ORF10440P | |
| 10435 | 140 aa hypothetical protein | |||
| 9110 | repressor protein CI | |||
| 9105 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco2071ORF9105P |
| 9100 | R | Sso1099IP (100% identity) | CTGCAG | Eco2071ORF9105P |
| 9095 | 215 aa hypothetical protein | |||
| 9010 | regulatory protein | |||
| 9005 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco2071ORF9005P |
| 9000 | 70 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21095 | 97 aa hypothetical protein | |||
| 21090 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco2071ORF21085P |
| 21085 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco2071ORF21085P |
| 21080 | serine protease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3575 | endoribonuclease SymE | |||
| ??? | R | EcoS14GmrSDP (100% identity) | Eco2071GmrSDP | |
| 3560 | 54 aa hypothetical protein | |||