Escherichia coli O104:H4 2011C-3493 |
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Putative Escherichia coli O104:H4 2011C-3493 RM systems
Ref: Johnson,S.L. et al. unpublished
REBASE ref # 14982
| Sequence length: | GenBank #: | |
| Chromosome: | 5,273,097 bp | CP003289 |
| plasmid pESBL-EA11: | 88,544 bp | CP003290 |
REBASE acronym: Eco3493
Org_num: 9416
All begin O3K_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21785 | 550 aa hypothetical protein | |||
| 21790 | R | SspS13ORF3945P (100% identity) | Eco3493ORF21795P | |
| 21795 | M | M.SspS13ORF3945P (100% identity) | M.Eco3493ORF21795P | |
| 21800 | S | S.SspS13ORF3945P (100% identity) | S.Eco3493ORF21795P | |
| 21805 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2130 | cell division protein DamX | |||
| 2135 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3493DamP |
| 2140 | ribulose-phosphate 3-epimerase | |||
| 2650 | 59 aa hypothetical protein | |||
| 2655 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco3493ORF2655P |
| 2660 | global DNA-binding transcriptional dual | |||
| 9825 | hydrolase | |||
| 9830 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco3493DcmP |
| 9835 | V | V.SsoSE61DcmP (100% identity) | V.Eco3493DcmP | |
| 9840 | DMT superfamily transporter inner | |||
| 10360 | 164 aa hypothetical protein | |||
| 10365 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco3493ORF10365P |
| 10370 | LexA repressor | |||
| 10405 | 67 aa hypothetical protein | |||
| 10410 | M | M.EcoOS402ORF3850P (100% identity) | A | M.Eco3493ORF10410P |
| 10415 | 617 aa hypothetical protein | |||
| 14255 | 92 aa hypothetical protein | |||
| 14260 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco3493ORF14260P |
| 14265 | 65 aa hypothetical protein | |||
| 16190 | repressor protein CI | |||
| 16195 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco3493ORF16195P |
| 16200 | R | Sso1099IP (100% identity) | CTGCAG | Eco3493ORF16195P |
| 16205 | 257 aa hypothetical protein | |||
| 16290 | regulatory protein | |||
| 16295 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.Eco3493ORF16295P |
| 16300 | 70 aa hypothetical protein | |||
| plasmid pESBL-EA11 | ||||
| 25842 | 308 aa hypothetical protein | |||
| 25847 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.Eco3493ORF25847P |
| 25852 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4555 | 97 aa hypothetical protein | |||
| 4560 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco3493ORF4565P |
| 4565 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco3493ORF4565P |
| 4570 | serine protease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21805 | endoribonuclease SymE | |||
| ??? | R | EcoM1887GmrSDP (65% identity) | Eco3493GmrDP | |
| ??? | Uncharacterized protein | |||
| 21805 | endoribonuclease SymE | |||
| ??? | R | EcoS14GmrSDP (100% identity) | Eco3493GmrSD2P | |
| 21820 | 54 aa hypothetical protein | |||