Escherichia coli O104:H4 2009EL-2050 |
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Putative Escherichia coli O104:H4 2009EL-2050 RM systems
Ref: Johnson,S.L. et al. unpublished
REBASE ref # 14982
| Sequence length: | GenBank #: | |
| Chromosome: | 5,253,138 bp | CP003297 |
| plasmid p09EL50: | 109,274 bp | CP003298 |
REBASE acronym: Eco2009
Org_num: 9414
All begin O3M_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21685 | 550 aa hypothetical protein | |||
| 21690 | R | SspS13ORF3945P (100% identity) | Eco2009ORF21695P | |
| 21695 | M | M.SspS13ORF3945P (100% identity) | M.Eco2009ORF21695P | |
| 21700 | S | S.SspS13ORF3945P (100% identity) | S.Eco2009ORF21695P | |
| 21705 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2175 | cell division protein DamX | |||
| 2180 | M | DNA adenine methylase | GATC | M.Eco2009DamP |
| 2185 | ribulose-phosphate 3-epimerase | |||
| 2695 | 59 aa hypothetical protein | |||
| 2700 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco2009ORF2700P |
| 2705 | global DNA-binding transcriptional dual | |||
| 9785 | hydrolase | |||
| 9790 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco2009DcmP |
| 9795 | V | V.SsoSE61DcmP (100% identity) | V.Eco2009DcmP | |
| 9800 | DMT superfamily transporter inner | |||
| 10325 | 164 aa hypothetical protein | |||
| 10330 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco2009ORF10330P |
| 10335 | LexA repressor | |||
| 14235 | 92 aa hypothetical protein | |||
| 14240 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco2009ORF14240P |
| 14245 | 65 aa hypothetical protein | |||
| 16165 | repressor protein CI | |||
| 16170 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco2009ORF16170P |
| 16175 | R | Sso1099IP (100% identity) | CTGCAG | Eco2009ORF16170P |
| 16180 | 215 aa hypothetical protein | |||
| 16265 | regulatory protein | |||
| 16270 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco2009ORF16270P |
| 16275 | 70 aa hypothetical protein | |||
| plasmid p09EL50 | ||||
| 25794 | 76 aa hypothetical protein | |||
| 25799 | M | M.Sso8361ORFCP (100% identity) | GATC | M.Eco2009ORF25799P |
| 25804 | 269 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4600 | 97 aa hypothetical protein | |||
| 4605 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco2009ORF4610P |
| 4610 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco2009ORF4610P |
| 4615 | serine protease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21705 | endoribonuclease SymE | |||
| ??? | R | EcoS14GmrSDP (100% identity) | Eco2009GmrSDP | |
| 21720 | 54 aa hypothetical protein | |||