Escherichia coli O32:H37 P4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O32:H37 P4 RM systems
Ref: Blum,S. et al. J. Bacteriol. 194 (14), 3732 (2012)
REBASE ref # 14675
GenBank #: AJQW00000000
REBASE acronym: EcoP4
Org_num: 9129
All begin UWO_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18660 | endoribonuclease SymE | |||
| 18665 | S | S.Ecos15955ORF12100P (100% identity) | S.EcoP4ORFAP | |
| ??? | M | M.Ecos15955ORF12100P (100% identity) | M.EcoP4ORFAP | |
| 18680 | R | Ecos15955ORF12100P (99% identity) | EcoP4ORFAP | |
| ??? | hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 820 | DMT superfamily transporter inner | |||
| 825 | V | V.SsoSE61DcmP (100% identity) | V.EcoP4DcmP | |
| 830 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoP4DcmP |
| 835 | hydrolase | |||
| 3043 | phage capsid protein | |||
| 3048 | M | M.Ecoww7ORF20P (100% identity) | TGGCCA | M.EcoP4ORF3048P |
| 3053 | R | EcoR7ORF1275P (100% identity) | EcoP4ORF3048P | |
| 3058 | replication protein A | |||
| 8217 | 59 aa hypothetical protein | |||
| 8222 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoP4ORF8222P |
| 8227 | global DNA-binding transcriptional dual | |||
| 14391 | cell division protein DamX | |||
| 14396 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoP4DamP |
| 14401 | ribulose-phosphate 3-epimerase | |||
| 19728 | 129 aa hypothetical protein | |||
| 19733 | M | M.SflN92ORF24820P (100% identity) | M.EcoP4ORF19733P | |
| 19738 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18680 | type I restriction enzyme EcoKI subunit R | |||
| ??? | R | Ssp28760MrrP (99% identity) | EcoP4MrrP | |
| 18695 | GTP-binding protein YjiA | |||