Escherichia coli DEC15D |
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Putative Escherichia coli DEC15D RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIHR00000000
REBASE acronym: EcoDEC15D
Org_num: 9097
All begin ECDEC15D_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4981 | phage integrase family protein | |||
| 4982 | R | Ecos4422ORF22930P (100% identity) | EcoDEC15DORF4984P | |
| 4983 | S | S.Ecos4422ORF22930P (100% identity) | S.EcoDEC15DORF4984P | |
| ??? | M | M.EcoDEC15EORF5344P (100% identity) | M.EcoDEC15DORF4984P | |
| 4986 | 277 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 649 | phage/conjugal plasmid C-4 type zinc finger, | |||
| 650 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.EcoDEC15DORF650P |
| 651 | bacteriophage replication protein | |||
| 867 | 140 aa hypothetical protein | |||
| 868 | M | M.EcoDEC15EORF1145P (100% identity) | M.EcoDEC15DORF868P | |
| 869 | 84 aa hypothetical protein | |||
| 877 | antitermination family protein | |||
| 878 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoDEC15DORF878P |
| 882 | 9-O-acetyl-N-acetylneuraminate esterase | |||
| 1155 | protein ninB | |||
| 1156 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoDEC15DORF1156P |
| 1157 | endonuclease | |||
| 2233 | DNA mismatch endonuclease of the very short | |||
| 2234 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoDEC15DORF2234P |
| 2235 | HD domain protein | |||
| 2232 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2233 | V | V.SsoSE61DcmP (100% identity) | V.EcoDEC15DDcmP | |
| 2234 | cytosine-specific methyltransferase | |||
| 3690 | fis transcriptional dual regulator | |||
| 3691 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoDEC15DORF3691P |
| 3692 | 37 aa hypothetical protein | |||
| 3805 | ribulose-phosphate 3-epimerase | |||
| 3806 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC15DDamP |
| 3807 | cell division protein DamX | |||
| 4505 | 40 aa hypothetical protein | |||
| 4506 | M | M.SflFF38ORF15P (100% identity) | GGCC | M.EcoDEC15DORF4506P |
| 4507 | 329 aa hypothetical protein | |||
| 4938 | integrase | |||
| 4939 | M | M.EcoM1D1ORF4353P (100% identity) | CYCGRG | M.EcoDEC15DORF4939P |
| 4940 | R | EcoM1D1ORF4353P (100% identity) | CYCGRG | EcoDEC15DORF4939P |
| 4941 | 104 aa hypothetical protein | |||