Escherichia coli DEC8C |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli DEC8C RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIGH00000000
REBASE acronym: EcoDEC8C
Org_num: 9060
All begin ECDEC8C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 56 | 55 aa hypothetical protein | |||
| 57 | S | S.EcoDEC10DORF5678P (100% identity) | S.EcoDEC8CORF58P | |
| ??? | M | M.EcoO26ORF5541P (100% identity) | M.EcoDEC8CORF58P | |
| ??? | R | EcosLF82ORF3455P (100% identity) | EcoDEC8CORF58P | |
| 61 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1494 | nonspecific DNA binding protein | |||
| 1495 | M | M.EcoE2865ORF5776P (99% identity) | M.EcoDEC8CORF1495P | |
| 1496 | 46 aa hypothetical protein | |||
| 2114 | 188 aa hypothetical protein | |||
| 2115 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoDEC8CORF2115P |
| 2116 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoDEC8CORF2115P |
| 2117 | 55 aa hypothetical protein | |||
| 3136 | carboxylate/Amino Acid/Amine Transporter family | |||
| 3137 | V | V.SflSTLE3DcmP (100% identity) | V.EcoDEC8CDcmP | |
| 3138 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoDEC8CDcmP |
| 3139 | 142 aa hypothetical protein | |||
| 2928 | 104 aa hypothetical protein | |||
| ??? | M | M.Sen58011ORF9805P (97% identity) | M.EcoDEC8CORF2929P | |
| 2931 | 143 aa hypothetical protein | |||
| 3249 | 41 aa hypothetical protein | |||
| 3250 | M | M.EcopO26ORF185P (100% identity) | M.EcoDEC8CORF3250P | |
| 3251 | yceA protein | |||
| 4084 | protein ninB | |||
| 4085 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoDEC8CORF4085P |
| 4086 | antirepressor | |||
| 4114 | lexA DNA binding domain protein | |||
| 4115 | M | M.EcoSTEC508ORF5750P (100% identity) | GATC | M.EcoDEC8CORF4115P |
| 4116 | 44 aa hypothetical protein | |||
| 4954 | fis transcriptional dual regulator | |||
| 4955 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoDEC8CORF4955P |
| 4956 | 37 aa hypothetical protein | |||
| 5079 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC8CDamP |
| 5081 | cell division protein DamX | |||
| 5913 | 38 aa hypothetical protein | |||
| ??? | M | M.EcoSO179ORF27060P (100% identity) | M.EcoDEC8CORF5914P | |
| 5915 | 166 aa hypothetical protein | |||
| 6295 | 41 aa hypothetical protein | |||
| 6296 | M | M.Xca80ORFEP (100% identity) | M.EcoDEC8CORF6296P | |
| 6297 | yceA protein | |||
| 6467 | 226 aa hypothetical protein | |||
| 6468 | M | M.SenYU39ORF5083P (100% identity) | M.EcoDEC8CORF6468P | |
| 6469 | glutaminyl-tRNA synthetase | |||