Escherichia coli DEC4D |
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Putative Escherichia coli DEC4D RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFN00000000
REBASE acronym: EcoDEC4D
Org_num: 9037
All begin ECDEC4D_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5373 | type I restriction-modification system, | |||
| ??? | S | S.EcoDEC4FORF5297P (100% identity) | S.EcoDEC4DORF5376P | |
| 5376 | M | M.EcosPA8ORF17615P (100% identity) | M.EcoDEC4DORF5376P | |
| 5377 | R | Ecos1613ORF27060P (100% identity) | EcoDEC4DORF5376P | |
| 5378 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 85 | 44 aa hypothetical protein | |||
| 86 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoDEC4DORF86P |
| 87 | lexA DNA binding domain protein | |||
| 1350 | 41 aa hypothetical protein | |||
| 1351 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoDEC4DORF1351P | |
| 1352 | 73 aa hypothetical protein | |||
| 1725 | 94 aa hypothetical protein | |||
| 1726 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoDEC4DORF1726P | |
| 1729 | 9-O-acetyl-N-acetylneuraminate esterase | |||
| 2575 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2576 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC4DDcmP | |
| 2577 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC4DDcmP |
| 2578 | HD domain protein | |||
| 2811 | protein ninB | |||
| 2812 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoDEC4DORF2812P |
| 2813 | antirepressor | |||
| 3286 | membrane protein | |||
| 3287 | M | M.EcoE275aORFBP (99% identity) | GATC | M.EcoDEC4DORF3287P |
| 3288 | 47 aa hypothetical protein | |||
| 4123 | fis transcriptional dual regulator | |||
| 4124 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDEC4DORF4124P |
| 4125 | 37 aa hypothetical protein | |||
| 4250 | ribulose-phosphate 3-epimerase | |||
| 4251 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC4DDamP |
| 4252 | cell division protein DamX | |||
| 5292 | restriction endonuclease | |||
| ??? | R | EcoS3ORF17765P (87% identity) | RGGNCCY | EcoDEC4DORF5295P |
| 5295 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoDEC4DORF5295P |
| 5296 | 41 aa hypothetical protein | |||
| 5322 | helicase conserved C-terminal domain protein | |||
| 5323 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoDEC4DORF5323P |