Escherichia coli DEC4C |
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Putative Escherichia coli DEC4C RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFM00000000
REBASE acronym: EcoDEC4C
Org_num: 9036
All begin ECDEC4C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5633 | type I restriction-modification system, | |||
| 5634 | S | S.EcoDEC4FORF5297P (100% identity) | S.EcoDEC4CORF5635P | |
| 5635 | M | M.EcosPA8ORF17615P (100% identity) | M.EcoDEC4CORF5635P | |
| ??? | R | Ecos1613ORF27060P (100% identity) | EcoDEC4CORF5635P | |
| 5638 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 111 | 159 aa hypothetical protein | |||
| 112 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoDEC4CORF112P |
| 113 | lexA DNA binding domain protein | |||
| 118 | 68 aa hypothetical protein | |||
| 119 | M | DNA methylase | M.EcoDEC4CORF119P | |
| 120 | phage holin, lambda family | |||
| 1680 | 94 aa hypothetical protein | |||
| 1681 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoDEC4CORF1681P | |
| 1684 | 9-O-acetyl-N-acetylneuraminate esterase | |||
| 1952 | 73 aa hypothetical protein | |||
| 1953 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoDEC4CORF1953P | |
| 1954 | 41 aa hypothetical protein | |||
| 2220 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoDEC4CORF2220P | |
| 2221 | 65 aa hypothetical protein | |||
| 2690 | carboxylate/Amino Acid/Amine Transporter family | |||
| ??? | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC4CDcmP | |
| 2692 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC4CDcmP |
| 2693 | HD domain protein | |||
| 2748 | 385 aa hypothetical protein | |||
| 2749 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoDEC4CORF2749P |
| 2750 | phage antitermination Q family protein | |||
| 4215 | fis transcriptional dual regulator | |||
| 4216 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDEC4CORF4216P |
| 4217 | 37 aa hypothetical protein | |||
| 4278 | ribulose-phosphate 3-epimerase | |||
| 4279 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC4CDamP |
| 4280 | cell division protein DamX | |||
| 5580 | helicase conserved C-terminal domain protein | |||
| 5581 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoDEC4CORF5581P |
| 5304 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoDEC4CORFBAP | |
| 5307 | 109 aa hypothetical protein | |||
| 5923 | lexA DNA binding domain protein | |||
| 5924 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoDEC4CORF5924P |
| 5925 | phage O protein | |||