Escherichia coli DEC3D |
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Putative Escherichia coli DEC3D RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIFH00000000
REBASE acronym: EcoDEC3D
Org_num: 9030
All begin ECDEC3D_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5493 | type I restriction-modification system, | |||
| 5494 | S | S.EcoDEC4FORF5297P (100% identity) | S.EcoDEC3DORF5495P | |
| 5495 | M | M.EcosPA8ORF17615P (100% identity) | M.EcoDEC3DORF5495P | |
| ??? | R | Ecos1613ORF27060P (100% identity) | EcoDEC3DORF5495P | |
| 5498 | 96 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | similar to DNA methylase | GATC | M.EcoDEC3DORF1332P |
| 1333 | 225 aa hypothetical protein | |||
| 1821 | 65 aa hypothetical protein | |||
| 1822 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoDEC3DORF1822P | |
| 1825 | 9-O-acetyl-N-acetylneuraminate esterase | |||
| ??? | M | M.EcoDEC3AORF1981P (100% identity) | M.EcoDEC3DORF2068P | |
| 2069 | 40 aa hypothetical protein | |||
| 2702 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2703 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC3DDcmP | |
| 2704 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC3DDcmP |
| 2705 | HD domain protein | |||
| 2849 | 73 aa hypothetical protein | |||
| 2850 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoDEC3DORF2850P | |
| 2851 | 41 aa hypothetical protein | |||
| 3085 | 133 aa hypothetical protein | |||
| 3086 | M | M.Eph2851ORFAP (99% identity) | GATC | M.EcoDEC3DORF3086P |
| 3087 | protein ninB | |||
| 4333 | fis transcriptional dual regulator | |||
| 4334 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDEC3DORF4334P |
| 4335 | 37 aa hypothetical protein | |||
| 4460 | ribulose-phosphate 3-epimerase | |||
| 4461 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC3DDamP |
| 4462 | cell division protein DamX | |||
| 5441 | helicase conserved C-terminal domain protein | |||
| 5442 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoDEC3DORF5442P |