Escherichia coli DEC1D |
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Putative Escherichia coli DEC1D RM systems
Ref: Rasko,D. et al. unpublished
REBASE ref # 14514
GenBank #: AIEY00000000
REBASE acronym: EcoDEC1D
Org_num: 8930
All begin ECDEC1D_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5395 | 238 aa hypothetical protein | |||
| 5396 | R | EcoO127I (100% identity) | EcoDEC1DORF5400P | |
| 5397 | macro domain protein | |||
| 5398 | 218 aa hypothetical protein | |||
| 5399 | S | S.EcoO127I (100% identity) | S.EcoDEC1DORF5400P | |
| 5400 | M | M.EcoO127I (100% identity) | M.EcoDEC1DORF5400P | |
| 5401 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 265 | zinc-binding dehydrogenase family protein | |||
| 268 | M | M.Eho76201ORFBP (97% identity) | CCGCGG | M.EcoDEC1DORF268P |
| 269 | R | EcoSCU172ORF2910P (100% identity) | CCGCGG | EcoDEC1DORF268P |
| 270 | resolvase, N terminal domain protein | |||
| 1254 | phage/conjugal plasmid C-4 type zinc finger, | |||
| 1255 | M | DNA adenine methylase | GATC | M.EcoDEC1DORF1255P |
| 1256 | bacteriophage replication protein | |||
| 1663 | 65 aa hypothetical protein | |||
| 1664 | M | M.Eco899037ORF14445P (100% identity) | M.EcoDEC1DORF1664P | |
| 1668 | tciA | |||
| 2193 | 166 aa hypothetical protein | |||
| 2194 | M | M.EcoC316ORF10445P (99% identity) | M.EcoDEC1DORF2194P | |
| 2195 | 546 aa hypothetical protein | |||
| 2644 | 306 aa hypothetical protein | |||
| 2645 | V | V.EcoDEC2EDcmP (100% identity) | V.EcoDEC1DDcmP | |
| 2646 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoDEC1DDcmP |
| 2647 | 231 aa hypothetical protein | |||
| 4109 | DNA-binding protein fis | |||
| 4110 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.EcoDEC1DORF4110P |
| 4111 | 37 aa hypothetical protein | |||
| 4276 | ribulose-phosphate 3-epimerase | |||
| 4277 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDEC1DDamP |
| 4278 | protein damX | |||
| 4611 | 71 aa hypothetical protein | |||
| ??? | M | M.KpnYN1ORFGP (89% identity) | M.EcoDEC1DORFAP | |
| 4613 | helix-turn-helix protein | |||
| 5216 | replication protein | |||
| 5217 | M | M.SflFF35ORF16050P (100% identity) | GATC | M.EcoDEC1DORF5217P |
| 5218 | lexA DNA binding domain protein | |||