Escherichia coli DEC1C |
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Putative Escherichia coli DEC1C RM systems
Ref: Rasko,D. et al. unpublished
REBASE ref # 14514
GenBank #: AIEX00000000
REBASE acronym: EcoDEC1C
Org_num: 8929
All begin ECDEC1C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2357 | S | DNA-specific restriction modification | S.EcoDEC1CORF2358P | |
| 2358 | M | M.EcoDEC2DORF4922P (100% identity) | M.EcoDEC1CORF2358P | |
| 2359 | R | EcoECB1ORF9045P (100% identity) | EcoDEC1CORF2358P | |
| 2360 | 180 aa hypothetical protein | |||
| 3598 | 238 aa hypothetical protein | |||
| 3599 | R | EcoO127I (100% identity) | EcoDEC1CORF3603P | |
| 3600 | 355 aa hypothetical protein | |||
| 3601 | 218 aa hypothetical protein | |||
| 3602 | S | S.EcoO127I (100% identity) | S.EcoDEC1CORF3603P | |
| 3603 | M | M.EcoO127I (100% identity) | M.EcoDEC1CORF3603P | |
| 3604 | 79 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 877 | phage/conjugal plasmid C-4 type zinc finger, | |||
| 878 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoDEC1CORF878P |
| 879 | bacteriophage replication protein | |||
| 1254 | 65 aa hypothetical protein | |||
| 1255 | M | M.EcoS7438ORFNP (100% identity) | M.EcoDEC1CORF1255P | |
| 1258 | membrane protein | |||
| 2006 | 50 aa hypothetical protein | |||
| 2007 | M | M.Eco8959ORF93P (100% identity) | M.EcoDEC1CORF2007P | |
| 2008 | nonspecific DNA binding protein | |||
| 2317 | 222 aa hypothetical protein | |||
| 2318 | V | V.EcoDEC2EDcmP (100% identity) | V.EcoDEC1CDcmP | |
| 2319 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoDEC1CDcmP |
| 2320 | HD domain protein | |||
| 3566 | istB-like ATP binding family protein | |||
| 3567 | M | M.EcoDEC1AORF4666P (100% identity) | GATC | M.EcoDEC1CORF3567P |
| 3568 | lexA DNA binding domain protein | |||
| 3979 | fis transcriptional dual regulator | |||
| 3980 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.EcoDEC1CORF3980P |
| 3981 | 37 aa hypothetical protein | |||
| 4088 | ribulose-phosphate 3-epimerase | |||
| 4089 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDEC1CDamP |
| 4090 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5345 | M | methylation subunit, type III | M.EcoDEC1CORF5345P | |
| 5346 | R | EcoSCU172ORF3240P (88% identity) | EcoDEC1CORF5345P | |
| 4448 | helicase conserved C-terminal domain protein | |||
| 4449 | M | M.EcoR71ORF22205P (86% identity) | M.EcoDEC1CORF4449P | |