Escherichia coli O7:K1 CE10 |
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Putative Escherichia coli O7:K1 CE10 RM systems
Ref: Lu,S. et al. unpublished
REBASE ref # 13685
| Sequence length: | GenBank #: | |
| Chromosome: | 5,313,531 bp | CP003034 |
| plasmid pCE10C: | 4,197 bp | CP003037 |
REBASE acronym: EcoCE10
Org_num: 7846
All begin CE10_, CE10_C
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5046 | 428 aa hypothetical protein | |||
| 5047 | S | S.EcoSP5ORF1945P (100% identity) | S.EcoCE10ORF5048P | |
| 5048 | M | M.EcoSP5ORF1945P (100% identity) | M.EcoCE10ORF5048P | |
| 5049 | 42 aa hypothetical protein | |||
| 5086 | toxic peptide regulated by antisense sRNA symR | |||
| 5087 | S | S.EcoSP5ORF2185P (100% identity) | CAAYNNNNNNNNTGAG | S.EcoCE10ORF5088P |
| 5088 | M | M.SflTORF4636P (100% identity) | CAAYNNNNNNNNTGAG | M.EcoCE10ORF5088P |
| 5089 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | EcoCE10ORF5088P |
| 5090 | 148 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1455 | 65 aa hypothetical protein | |||
| 1456 | M | M.SsoL4094ORF17545P (100% identity) | A | M.EcoCE10ORF1456P |
| 1459 | 617 aa unknown protein encoded within prophage | |||
| 2239 | inner membrane protein, predicted transporter, | |||
| 2240 | V | V.SflC32DcmP (74% identity) | V.EcoCE10DcmP | |
| 2241 | M | M.EcoSP5DcmP (100% identity) | CCWGG | M.EcoCE10DcmP |
| 2242 | hydrolase, HD superfamily | |||
| 2466 | 142 aa hypothetical protein | |||
| 2469 | M | M.Eco10766ORF1613P (100% identity) | M.EcoCE10ORF2469P | |
| 2470 | outer membrane porin protein NmpC | |||
| 2930 | integral membrane protein | |||
| 2931 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoCE10ORF2931P |
| 2932 | 47 aa hypothetical protein | |||
| 3053 | trans-translation protein | |||
| 3054 | R | Sso8033ORF3755P (99% identity) | CCWGG | EcoCE10ORF3055P |
| 3055 | M | M.EcoS7438ORFHP (100% identity) | CCWGG | M.EcoCE10ORF3055P |
| 3056 | 274 aa hypothetical protein | |||
| 3797 | global DNA-binding transcriptional dual | |||
| 3798 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoCE10ORF3798P |
| 3799 | membrane protein | |||
| 3903 | D-ribulose-5-phosphate 3-epimerase | |||
| 3904 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCE10DamP |
| 3905 | cell division protein that binds to the septal | |||
| 5136 | CPS-53 (KpLE1) prophage, predicted protein | |||
| 5137 | M | M.Sso30ORF925P (99% identity) | GATC | M.EcoCE10ORF5137P |
| 5138 | LexA repressor | |||
| 5143 | 75 aa hypothetical protein | |||
| 5144 | M | M.Sso63633ORF22290P (100% identity) | M.EcoCE10ORF5144P | |
| 5145 | DLP12 prophage, predicted phage lysis protein | |||
| plasmid pCE10C | ||||
| 1 | M | M.SsoII (100% identity) | CCNGG | M.EcoCE10ORF1P |
| ??? | R | SsoII (100% identity) | CCNGG | EcoCE10ORF1P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5049 | 42 aa hypothetical protein | |||
| 5050 | R | EcoSP5McrCP (100% identity) | EcoCE10McrCP | |
| 5051 | R | EcoSP5McrBP (100% identity) | EcoCE10McrBP | |
| 5052 | 301 aa hypothetical protein | |||