Escherichia coli O25b:H4-ST131 |
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Putative Escherichia coli O25b:H4-ST131 RM systems
Sequence name: chromosome C
GenBank: OX637964 (5,185,826 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| I | R | EcoST131bORFFP | AAAGNNNNGTT | 3882389-3885487 | |
| I | M | M.EcoST131bORFFP | AAAGNNNNGTT | 3885481-3887118 | |
| I | S | S.EcoST131bORFFP | AAAGNNNNGTT | 3887108-3888355 | |
| I | M | M.EcoST131bORFGP | RTACNNNNGTG | 4260010-4261629 | |
| I | S | S.EcoST131bORFGP | RTACNNNNGTG | 4261619-4262923 | |
| I | R | EcoST131bORFGAP | RTACNNNNGTG | 4263018-4263647 | |
| I | R | EcoST131bORFGBP | RTACNNNNGTG | 4263699-4266281 | |
| II | M | M.EcoST131bDamP | GATC | 372490-373326 | |
| II | M | M.EcoST131bORFEP | 1287883-1288533 c | ||
| II | M | M.EcoST131bDcmP | CCWGG | 1979184-1980602 | |
| II | V | V.EcoST131bDcmP | 1980421-1981053 | ||
| II | M | M.EcoST131bORFKP | GTCGAC | 2114716-2115756 | |
| II | R | R1.EcoST131bORFKP | GTCGAC | 2115725-2116414 c | |
| II | R | R2.EcoST131bORFKP | GTCGAC | 2116417-2117574 c | |
| II | M | M.EcoST131bORFJP | A | 2118176-2119225 | |
| II | M | M.EcoST131bORFIP | A | 2710486-2711535 c | |
| II | M | M.EcoST131bORFBP | 3134405-3135259 c | ||
| II | R | EcoST131bORFHP | GGTCTC | 4331715-4333454 | |
| II | M | M1.EcoST131bORFHP | GGTCTC | 4333467-4334657 c | |
| II | M | M2.EcoST131bORFHP | GGTCTC | 4334650-4336290 c | |
| IV | R | EcoST131bMrrP | 4258837-4259946 | ||
| IV | R | EcoST131bMcrBP | 4328251-4330326 | ||
| IV | R | EcoST131bMcrCP | 4330319-4331605 | ||
Sequence name: chromosome C
GenBank: OY019088 (5,159,704 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| I | R | EcoH4ORFGP | RTACNNNNGTG | 3649006-3652269 c | |
| I | S | S.EcoH4ORFGP | RTACNNNNGTG | 3652364-3653668 c | |
| I | M | M.EcoH4ORFGP | RTACNNNNGTG | 3653658-3655277 c | |
| II | V | V.EcoH4DcmP | 664822-665454 c | ||
| II | M | M.EcoH4DcmP | CCWGG | 665273-666691 c | |
| II | M | M.EcoH4ORFDP | ATGCAT | 2248445-2249329 | |
| II | M | M.EcoH4DamP | GATC | 2346394-2347230 c | |
| II | M | M.EcoH4ORFEP | 3311556-3312608 | ||
| II | R | EcoH4ORFEP | 3312613-3315573 | ||
| II | M | M1.EcoH4ORFFP | GGTCTC | 3575201-3576841 | |
| II | M | M2.EcoH4ORFFP | GGTCTC | 3576834-3578024 | |
| II | R | EcoH4ORFFBP | GGTCTC | 3578037-3579119 c | |
| II | R | EcoH4ORFFAP | GGTCTC | 3580442-3581029 c | |
| II | M | M.EcoH4ORFHP | 4728582-4729436 | ||
| II | M | M.EcoH4ORFIP | A | 5150395-5151444 | |
| IV | R | EcoH4McrCP | 3581139-3582425 c | ||
| IV | R | EcoH4McrBP | 3582418-3584493 c | ||
| IV | R | EcoH4MrrP | 3655341-3656450 c | ||
Sequence name: chromosome C
GenBank: OX637959 (4,922,175 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| I | R | EcoST131cORFEP | AAAGNNNNGTT | 3765556-3768654 | |
| I | M | M.EcoST131cORFEP | AAAGNNNNGTT | 3768648-3770285 | |
| I | S | S.EcoST131cORFEP | AAAGNNNNGTT | 3770275-3771522 | |
| II | M | M.EcoST131cDamP | GATC | 374361-375197 | |
| II | M | M.EcoST131cDcmP | CCWGG | 2021944-2023362 | |
| II | V | V.EcoST131cDcmP | 2023181-2023813 | ||
| II | R | EcoST131cORFFP | GGTCTC | 4166860-4168599 | |
| II | M | M1.EcoST131cORFFP | GGTCTC | 4168612-4169802 c | |
| II | M | M2.EcoST131cORFFP | GGTCTC | 4169795-4171435 c | |
| II | M | M.EcoST131cORFGP | RCCGGY | 4218272-4219468 | |
| II | R | EcoST131cORFBP | 4224592-4225464 | ||
| IV | R | EcoST131cMcrBP | 4163396-4165471 | ||
| IV | R | EcoST131cMcrCP | 4165464-4166750 | ||
Sequence name: chromosome C
GenBank: OX637961 (4,918,295 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| I | R | EcoST131dORFFP | AAAGNNNNGTT | 3761677-3764775 | |
| I | M | M.EcoST131dORFFP | AAAGNNNNGTT | 3764769-3766406 | |
| I | S | S.EcoST131dORFFP | AAAGNNNNGTT | 3766396-3767643 | |
| II | M | M.EcoST131dDamP | GATC | 374361-375197 | |
| II | M | M.EcoST131dDcmP | CCWGG | 2021947-2023365 | |
| II | V | V.EcoST131dDcmP | 2023184-2023816 | ||
| II | R | EcoST131dORFGP | GGTCTC | 4162981-4164720 | |
| II | M | M1.EcoST131dORFGP | GGTCTC | 4164733-4165923 c | |
| II | M | M2.EcoST131dORFGP | GGTCTC | 4165916-4167556 c | |
| II | M | M.EcoST131dORFHP | RCCGGY | 4214393-4215589 | |
| II | R | EcoST131dORFBP | 4220713-4221585 | ||
| IV | R | EcoST131dMcrBP | 4159517-4161592 | ||
| IV | R | EcoST131dMcrCP | 4161585-4162871 | ||
Sequence name: plasmid P1
GenBank: OX637960 (162,859 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| I | R | EcoST131cORFDP | CAAYNNNNNNCTGG | 147710-150826 c | |
| I | S | S.EcoST131cORFDP | CAAYNNNNNNCTGG | 150948-152231 c | |
| I | M | M.EcoST131cORFDP | CAAYNNNNNNCTGG | 152228-153790 c | |
| II | M | M.EcoST131cORFCP | SAY | 135600-136283 c | |
Sequence name: plasmid P1
GenBank: OX637962 (146,919 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| I | R | EcoST131dORFEP | CAAYNNNNNNCTGG | 131770-134886 c | |
| I | S | S.EcoST131dORFEP | CAAYNNNNNNCTGG | 135008-136291 c | |
| I | M | M.EcoST131dORFEP | CAAYNNNNNNCTGG | 136288-137850 c | |
| II | M | M.EcoST131dORFDP | SAY | 119660-120343 c | |
Sequence name: plasmid P1
GenBank: OX637965 (123,938 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| II | M | M.EcoST131bORFDP | SAY | 106795-107478 c | |
Sequence name: plasmid P2
GenBank: OY019090 (100,743 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| II | M | M.EcoH4ORFBP | 10925-11608 | ||
Sequence name: plasmid P2
GenBank: OX637963 (78,028 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| II | M | M.EcoST131dORFCP | 21973-22656 | ||
Sequence name: plasmid P2
GenBank: OX637966 (74,854 bp)
| Type | Gene | Name | Predicted Rec Seq |
Contig | Coordinates |
|---|---|---|---|---|---|
| II | M | M.EcoST131bORFCP | 15282-15965 | ||