Escherichia coli O157:H7 Sakai |
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Putative Escherichia coli O157:H7 Sakai RM systems
Ref: Makino,K. et al. DNA Res. 5 (1), 1-9 (1998)
REBASE ref # 7813
Complete sequence: 5,498,578 bp
GenBank #: BA000007 (NC_002695)
REBASE acronym: EcoKO157
Org_num: 3316
All begin ECs_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5779 | toxic peptide regulated by antisense sRNA symR | |||
| 5306 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoKO157ORF5307P |
| 5307 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoKO157ORF5307P |
| 5308 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoKO157ORF5307P |
| 5309 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1195 | recombination protein | |||
| 1196 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoKO157ORF1196P |
| 1199 | phage antirepressor protein | |||
| 1779 | 65 aa hypothetical protein | |||
| 1780 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoKO157ORF1780P | |
| 1781 | 617 aa hypothetical protein | |||
| 1951 | 53 aa hypothetical protein | |||
| 1953 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoKO157ORF1953P | |
| 1954 | 329 aa hypothetical protein | |||
| 2697 | amino acid exporter for phenylalanine | |||
| 2698 | V | V.EcosPA8DcmP (100% identity) | V.EcoKO157DcmP | |
| 2699 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoKO157DcmP |
| 2700 | HD superfamily phosphohydrolase | |||
| 2980 | 58 aa hypothetical protein | |||
| 2981 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoKO157ORF2981P |
| 2982 | recombination protein | |||
| 4133 | global DNA-binding transcriptional dual | |||
| 4134 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoKO157ORF4134P |
| 4135 | 59 aa hypothetical protein | |||
| 4228 | D-ribulose-5-phosphate 3-epimerase | |||
| 4229 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoKO157DamP |
| 4230 | cell division protein DamX | |||
| 5261 | ATP-dependent helicase | |||
| 5262 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoKO157ORF5262P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5303 | 54 aa hypothetical protein | |||
| 5304 | R | Ecos1613GmrSP (100% identity) | EcoKO157GmrSP | |
| ??? | R | EcoX21GmrDP (100% identity) | EcoKO157GmrDP | |
| 5779 | toxic peptide regulated by antisense sRNA symR | |||