Escherichia coli O55:H7 USDA 5905 |
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Putative Escherichia coli O55:H7 USDA 5905 RM systems
Ref: Rump,L.V. et al. J. Bacteriol. 193 (8), 2058-2059 (2011)
REBASE ref # 12634
GenBank #: AEUB00000000
REBASE acronym: Eco5905
Org_num: 6893
All begin ECO5905_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15193 | endoribonuclease SymE | |||
| 15198 | S | S.EcoTB182AORF22480P (100% identity) | CACNNNNNNNCTGG | S.Eco5905ORF15203P |
| 15203 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco5905ORF15203P |
| 15208 | R | EcoTB182AORF22480P (100% identity) | CACNNNNNNNCTGG | Eco5905ORF15203P |
| 15223 | GTP-binding protein YjiA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5836 | 60 aa hypothetical protein | |||
| 5841 | M | DNA methylase | GATC | M.Eco5905ORF5841P |
| 13043 | global DNA-binding transcriptional dual | |||
| 13048 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco5905ORF13048P |
| 13053 | 59 aa hypothetical protein | |||
| 1602 | ribulose-phosphate 3-epimerase | |||
| 1607 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5905DamP |
| 1612 | cell division protein DamX | |||
| 14968 | Helicase family protein | |||
| 14973 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco5905ORF14973P |
| 5846 | recombination protein ninB from phage origin | |||
| 5851 | M | M.EcoDEC10FORF3559P (80% identity) | GATC | M.Eco5905ORF5851P |
| 5856 | NinF protein | |||
| 22230 | DMT superfamily transporter inner | |||
| 22235 | V | V.EcosPA8DcmP (100% identity) | V.Eco5905DcmP | |
| 22240 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco5905DcmP |
| 22245 | hydrolase | |||