Burkholderia gladioli BSR3 |
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Putative Burkholderia gladioli BSR3 RM systems
Ref: Seo,Y.-S. et al. unpublished
REBASE ref # 12807
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,413,616 bp | CP002599 (NC_015381) |
| chromosome 2: | 3,700,833 bp | CP002600 (NC_015376) |
| plasmid bgla_1p: | 276,215 bp | CP002601 (NC_015382) |
| plasmid bgla_2p: | 129,399 bp | CP002602 (NC_015377) |
| plasmid bgla_3p: | 128,650 bp | CP002603 (NC_015378) |
| plasmid bgla_4p: | 403,586 bp | CP002604 (NC_015383) |
REBASE acronym: BglBSR3
Org_num: 6829
All begin bgla_1g, bgla_1p, bgla_2g, bgla_2p, bgla_3p, bgla_4p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid bgla_4p | ||||
| 3390 | integrase catalytic subunit | |||
| 3400 | M | N-6 DNA methylase | M.BglBSR3ORF3400P | |
| 3410 | 196 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 10990 | 210 aa hypothetical protein | |||
| 11000 | M | M.Bgl14ORF25280P (90% identity) | M.BglBSR3ORF11000P | |
| 11010 | 67 aa hypothetical protein | |||
| 14250 | ATPase-like protein | |||
| 14260 | RM | Psa5ORF43280P (71% identity) | BglBSR3ORF14260P | |
| 14270 | alkaline phosphatase domain-containing protein | |||
| 18830 | 207 aa hypothetical protein | |||
| 18840 | M | M.BglBSR3ORF30480P (98% identity) | M.BglBSR3ORF18840P | |
| 18850 | 95 aa hypothetical protein | |||
| 27130 | 321 aa hypothetical protein | |||
| 27140 | M | M.PpsYY7ORF15460P (49% identity) | ACGGC | M.BglBSR3ORF27140P |
| 27150 | transposase mutator type | |||
| 27170 | 110 aa hypothetical protein | |||
| 27180 | M | M.Bgl25417ORF7151P (98% identity) | M.BglBSR3ORF27180P | |
| 27190 | 209 aa hypothetical protein | |||
| 30475 | 67 aa hypothetical protein | |||
| 30480 | M | M.BglZNS4ORF13135P (99% identity) | M.BglBSR3ORF30480P | |
| 30490 | 66 aa hypothetical protein | |||
| chromosome 2 | ||||
| 18110 | Tryptophan synthase, alpha subunit | |||
| 18120 | M | M.BglGB10ORFHP (82% identity) | GTWWAC | M.BglBSR3ORF18110P |
| 18130 | Tryptophan synthase, beta subunit | |||
| plasmid bgla_1p | ||||
| 390 | 168 aa hypothetical protein | |||
| 400 | M | M.BglBBB01ORFEP (99% identity) | M.BglBSR3ORF400P | |
| 410 | transposase | |||
| plasmid bgla_2p | ||||
| 640 | 168 aa hypothetical protein | |||
| 650 | M | M.BglBSR3ORF400P (99% identity) | M.BglBSR3ORF650P | |
| 660 | transposase | |||
| 980 | transcriptional regulator, XRE family protein | |||
| 990 | M | M.BglYH67ORFKP (79% identity) | M.BglBSR3ORF990P | |
| 1000 | pseudogene | |||
| plasmid bgla_3p | ||||
| 890 | 235 aa hypothetical protein | |||
| 900 | M | M2.Bgl94ORF17500P (66% identity) | M1.BglBSR3ORF900P | |
| 910 | M | M1.Bgl94ORF17500P (84% identity) | M2.BglBSR3ORF900P | |
| 920 | RepA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 200 | 263 aa hypothetical protein | |||
| 210 | R | BglZNS4ORF110P (100% identity) | CACAG | BglBSR3ORF220P |
| 220 | M | M.BglKRS027ORFBP (95% identity) | CACAG | M.BglBSR3ORF220P |
| 230 | Flagellar biosynthetic protein FliR | |||
| 38480 | 279 aa hypothetical protein | |||
| 38490 | M | M.Bps4372ORF1152P (55% identity) | M.BglBSR3ORF38490AP | |
| 38500 | transposase mutator type | |||
| 38510 | M | M.Bps4372ORF1152P (43% identity) | M.BglBSR3ORF38490BP | |
| 38520 | R | Bps4372ORF1152P (98% identity) | BglBSR3ORF38490P | |
| 38530 | 683 aa hypothetical protein | |||