Faecalibacterium prausnitzii L2/6 |
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Putative Faecalibacterium prausnitzii L2/6 RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12145
Complete sequence: 3,321,367 bp
GenBank #: FP929045
REBASE acronym: Fpr
Org_num: 6689
All begin FP2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13020 | Protein of unknown function DUF88. | |||
| 13030 | R | PmeBin52ORFHP (100% identity) | FprORF13100P | |
| 13050 | 119 aa hypothetical protein | |||
| 13060 | S | S3.CspLQ25I (59% identity) | S1.FprORF13100P | |
| 13070 | Site-specific recombinase XerD | |||
| 13090 | S | S1.PmeBin630ORFCP (90% identity) | S2.FprORF13100P | |
| 13100 | M | M.PmeBin52ORFHP (99% identity) | M.FprORF13100P | |
| 13110 | C | C.PmeBin52ORFHP (92% identity) | C.FprORF13100P | |
| 13130 | Bacterial mobilisation protein (MobC). | |||
| 17090 | 151 aa hypothetical protein | |||
| 17100 | M | M.PmeBin210ORFBP (99% identity) | M.FprORF17100P | |
| ??? | S | S1.Fsp3389ORF5830P (57% identity) | S.FprORF17100P | |
| 17120 | FRG domain. | |||
| 17130 | R | PmeBin210ORFBP (98% identity) | FprORF17100P | |
| 17140 | 154 aa hypothetical protein | |||
| 18250 | Predicted transcriptional regulators | |||
| 18260 | R | PmeBin71ORFDP (99% identity) | FprORF18320P | |
| 18270 | 328 aa hypothetical protein | |||
| 18280 | 195 aa hypothetical protein | |||
| 18290 | 255 aa hypothetical protein | |||
| 18300 | 63 aa hypothetical protein | |||
| 18310 | S | S.PmeBin71ORFDP (99% identity) | S.FprORF18320P | |
| 18320 | M | M.PmeBin71ORFDP (99% identity) | M.FprORF18320P | |
| 18330 | Predicted transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | type III restriction protein res subunit | |||
| ??? | M | M.Ece6ORF1868P (34% identity) | M.FprORFBP | |
| 3360 | TrbL/VirB6 plasmid conjugal transfer protein. | |||
| 3370 | M | M2.Cdi21247ORFGP (98% identity) | CTSAG | M.FprORF3370P |
| ??? | Transcriptional activator, adenine-specific DNA methyltransferase | |||
| 3370 | DNA modification methylase | |||
| ??? | M | M.EbaMTC7ORF6350P (95% identity) | GATC | M.FprORF3380P |
| ??? | DNA -methyltransferase | |||
| ??? | Transcriptional activator, adenine-specific DNA methyltransferase | |||
| ??? | M | M1.Cdi21247ORFGP (49% identity) | M.FprORF3390P | |
| 3400 | Site-specific recombinase XerD | |||
| 4570 | 129 aa hypothetical protein | |||
| ??? | M | M1.PmeBin204ORFFP (99% identity) | M.FprORF4580P | |
| 4590 | DNA modification methylase | |||
| ??? | Transcriptional activator, adenine-specific DNA methyltransferase | |||
| 4590 | M | M.Fsp2392ORF7890P (93% identity) | CTSAG | M.FprORF4590P |
| 4600 | SpoVG. | |||
| 6740 | 80 aa hypothetical protein | |||
| 6750 | M | M.PmeBin313ORFAP (97% identity) | GACGC | M.FprORF6750P |
| 6770 | single-strand binding protein | |||
| 12800 | 71 aa hypothetical protein | |||
| 12820 | M | M.PmeBin460ORFAP (95% identity) | GATC | M.FprORF12820P |
| 12830 | 162 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3230 | Site-specific recombinases, DNA invertase Pin | |||
| 3240 | M | M.PmeBin185ORFCP (71% identity) | M.FprORF3240P | |
| ??? | R | EspMGS26ORFBP (20% identity) | FprORF3240P | |
| ??? | DNA-cytosine methyltransferase | |||
| 12700 | Site-specific recombinases, DNA invertase Pin | |||
| 12710 | R | PmeBin356ORFCP (96% identity) | FprORF12720P | |
| 12720 | M | M.OspMM50ORF21100P (97% identity) | M.FprORF12720P | |
| 12730 | 185 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25700 | Transcriptional regulator | |||
| 25710 | R | 236 aa hypothetical protein | FprMcrBP | |
| 25720 | Predicted ATPase (AAA+ superfamily) | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16330 | Predicted HD-superfamily hydrolase | |||
| 16350 | M | M.PmeBin210ORFEP (77% identity) | GGCC | M.FprORF16350P |
| 16360 | Uncharacterized protein conserved in bacteria | |||